Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4□□□□□ -1.77
TMEM88BA6NKF7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4□□□□□ -1.77
TMEM88BA6NKF7 RNU1-18P-201ENST00000363062 164 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 RNU6-454P-201ENST00000364292 107 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 SNORA51.4-201ENST00000364993 124 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 RNU6-234P-201ENST00000365229 104 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 AL031003.1-201ENST00000404229 172 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 RPL30P4-201ENST00000429309 333 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 KRTAP19-11P-201ENST00000439851 104 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 AC018630.3-201ENST00000542637 96 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 MIR7154-201ENST00000620673 73 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 TNPO1P3-201ENST00000436471 2662 ntBASIC4□□□□□ -1.77
TMEM88BA6NKF7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
TMEM88BA6NKF7 AL136360.1-201ENST00000503377 1900 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 Y_RNA.150-201ENST00000363562 102 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 Y_RNA.243-201ENST00000364481 109 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 SNORA68.1-201ENST00000364537 132 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 SNORA54-201ENST00000384281 123 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 RNU6-1274P-201ENST00000384557 107 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 MIR218-1-201ENST00000384999 110 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 MIR1283-1-201ENST00000408494 87 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 AC080013.2-201ENST00000460866 323 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 RNA5SP154-201ENST00000516193 111 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 AL713866.2-201ENST00000603579 219 ntBASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
TMEM88BA6NKF7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 IPO8P1-201ENST00000455509 3109 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 AP001486.2-201ENST00000561652 5113 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 AC009487.4-201ENST00000624969 3585 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 RNU4-82P-201ENST00000362443 140 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 SNORD115-30-201ENST00000364117 82 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 RNU6-886P-201ENST00000384319 105 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 MIR548B-201ENST00000385247 97 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 MIR513A2-201ENST00000385249 127 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 BTF3P11-201ENST00000426582 477 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 TRBV12-2-201ENST00000489763 344 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 RNU6-966P-201ENST00000516479 104 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 RNU6-579P-201ENST00000516879 102 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 GTF3AP2-201ENST00000557014 266 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 MFSD8-233ENST00000641482 4860 ntBASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TMEM88BA6NKF7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RNU6-1272P-201ENST00000362776 107 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RNU6-438P-201ENST00000365561 103 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RNU6-211P-201ENST00000384047 107 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 MIR548M-201ENST00000408260 86 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RNA5SP293-201ENST00000410527 113 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RNU6-651P-201ENST00000411040 105 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RPS29P31-201ENST00000446147 164 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 RN7SL863P-201ENST00000462370 296 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 HMGN2P9-201ENST00000476875 229 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 AC109329.2-201ENST00000519658 482 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 LINC02471-203ENST00000641941 4752 ntBASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TMEM88BA6NKF7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.96□□□□□ -1.77
TMEM88BA6NKF7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 Y_RNA.304-201ENST00000365011 112 ntBASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 FO393413.1-201ENST00000402892 195 ntBASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 MIR1185-2-201ENST00000408687 86 ntBASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 AL049830.2-201ENST00000480072 201 ntBASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.96□□□□□ -1.78
TMEM88BA6NKF7 RNVU1-4-201ENST00000612985 164 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 216.5 ms