Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.34□□□□□ -1.87
PPARGC1AQ9UBK2 AC008739.2-201ENST00000597006 317 ntBASIC3.34□□□□□ -1.87
PPARGC1AQ9UBK2 MIR7112-201ENST00000616126 65 ntBASIC3.34□□□□□ -1.87
PPARGC1AQ9UBK2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.34□□□□□ -1.87
PPARGC1AQ9UBK2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PPARGC1AQ9UBK2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.34□□□□□ -1.88
PPARGC1AQ9UBK2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.34□□□□□ -1.88
PPARGC1AQ9UBK2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 UBE2WP1-201ENST00000362030 340 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 SNORA25.1-201ENST00000362326 128 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 RNU4-15P-201ENST00000362613 141 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 SNORD46.1-201ENST00000364139 104 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.269-201ENST00000364685 89 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.331-201ENST00000365267 102 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 RNU6-514P-201ENST00000384208 107 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.555-201ENST00000384673 110 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 AL512633.1-201ENST00000399931 655 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 AL357075.1-201ENST00000404107 726 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 RN7SKP220-201ENST00000410611 288 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 AL138752.1-201ENST00000452964 351 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 AC103975.1-201ENST00000482506 483 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 RPL36AP48-201ENST00000485521 314 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 RPS27P26-201ENST00000494583 239 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 MIR5680-201ENST00000577577 84 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 MIR2682-201ENST00000580305 110 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 MZT1P2-201ENST00000604387 248 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 RPL17P51-201ENST00000605218 238 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 TCL6_2.1-201ENST00000615162 119 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 UCA1.1-201ENST00000620952 75 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PPARGC1AQ9UBK2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 SNORA72.2-201ENST00000365028 127 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.498-201ENST00000384460 102 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AL603908.1-201ENST00000406098 201 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 RAB28P5-201ENST00000427490 651 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 POLR2KP2-201ENST00000438155 177 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 RRN3P3-201ENST00000549207 578 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AC008749.1-201ENST00000597650 306 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AL162424.1-201ENST00000602325 221 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AC007179.3-201ENST00000604976 235 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 YPEL5P2-201ENST00000605553 359 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AC005562.2-201ENST00000618264 111 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AC006001.4-201ENST00000622243 395 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 IGHVIII-44-202ENST00000636235 289 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 AL359854.1-201ENST00000614203 1594 ntBASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.32□□□□□ -1.88
PPARGC1AQ9UBK2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AC069528.2-201ENST00000624849 1991 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.275-201ENST00000364726 110 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.297-201ENST00000364950 91 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 MIR1298-201ENST00000408783 112 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 ELOCP21-201ENST00000412558 336 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 MTND5P15-201ENST00000434246 349 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AC006028.1-201ENST00000438379 402 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AC112771.1-201ENST00000463581 102 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 RPL27AP5-201ENST00000469428 449 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 SNORD11B-201ENST00000607707 90 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 AC000403.1-201ENST00000613696 3585 ntBASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PPARGC1AQ9UBK2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 RNU6-1264P-201ENST00000383891 107 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 Y_RNA.446-201ENST00000384178 104 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 AC097463.2-201ENST00000421074 142 ntBASIC3.3□□□□□ -1.88
PPARGC1AQ9UBK2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 289.4 ms