Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.47□□□□□ -2.01
PKP4Q99569 AC073910.1-201ENST00000445047 438 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 AC073901.1-201ENST00000462471 408 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.47□□□□□ -2.01
PKP4Q99569 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.47□□□□□ -2.01
PKP4Q99569 RNU5B-3P-201ENST00000516601 115 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 AC079598.5-201ENST00000547460 117 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 RPS29P30-201ENST00000600975 111 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 AC006023.1-201ENST00000603944 259 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 AL356157.2-201ENST00000605122 111 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 AL121655.1-201ENST00000605811 308 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 AC100812.1-201ENST00000607622 580 ntBASIC2.47□□□□□ -2.01
PKP4Q99569 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
PKP4Q99569 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PKP4Q99569 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
PKP4Q99569 RNU6-874P-201ENST00000362390 105 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.210-201ENST00000364161 110 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 RNU4-50P-201ENST00000364361 141 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.276-201ENST00000364732 109 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 RNU4-9P-201ENST00000364951 139 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.405-201ENST00000383979 100 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.451-201ENST00000384200 100 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 SNORA51.11-201ENST00000384442 131 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.524-201ENST00000384564 100 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.561-201ENST00000384694 100 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.618-201ENST00000410949 107 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 AC097463.2-201ENST00000421074 142 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 AL031659.1-201ENST00000447075 539 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 AL139109.1-201ENST00000455491 297 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 RPL36AP48-201ENST00000485521 314 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 Y_RNA.706-201ENST00000516933 99 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.46□□□□□ -2.02
PKP4Q99569 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.46□□□□□ -2.02
PKP4Q99569 MIR5092-201ENST00000583139 88 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.46□□□□□ -2.02
PKP4Q99569 Z75746.1-201ENST00000440243 2080 ntBASIC2.46□□□□□ -2.02
PKP4Q99569 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.46□□□□□ -2.02
PKP4Q99569 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
PKP4Q99569 SNORD32A-201ENST00000364805 84 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 RNA5SP125-201ENST00000364843 120 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 RNU6-968P-201ENST00000384076 107 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 RNU6-505P-201ENST00000384427 107 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PKP4Q99569 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.45□□□□□ -2.02
PKP4Q99569 AL358453.1-201ENST00000422522 250 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 AC007969.2-201ENST00000441891 191 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.45□□□□□ -2.02
PKP4Q99569 MED28P2-201ENST00000475771 317 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 RNA5SP320-201ENST00000516263 124 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 SNORA31.23-201ENST00000517219 133 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.45□□□□□ -2.02
PKP4Q99569 AL390123.1-201ENST00000603216 237 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 SCARNA4-201ENST00000629045 128 ntBASIC2.45□□□□□ -2.02
PKP4Q99569 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
PKP4Q99569 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PKP4Q99569 RNA5SP68-201ENST00000363885 119 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 U3.13-201ENST00000364804 214 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 RNU6-1286P-201ENST00000383871 107 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 RNU6-843P-201ENST00000384454 104 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 MIR27B-201ENST00000385129 97 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 MT-TG-201ENST00000387429 68 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 RPL21P1-201ENST00000399532 476 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 RPL23AP95-201ENST00000426806 265 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.44□□□□□ -2.02
PKP4Q99569 FCF1P4-201ENST00000448326 183 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.44□□□□□ -2.02
PKP4Q99569 AL353705.4-201ENST00000449661 238 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.44□□□□□ -2.02
PKP4Q99569 AC012308.1-201ENST00000451232 178 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.44□□□□□ -2.02
PKP4Q99569 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.44□□□□□ -2.02
PKP4Q99569 snoU13.30-201ENST00000458951 104 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.44□□□□□ -2.02
PKP4Q99569 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.44□□□□□ -2.02
PKP4Q99569 AC109329.1-201ENST00000518744 317 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 MRPS36P4-201ENST00000534436 298 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.44□□□□□ -2.02
PKP4Q99569 AC004486.1-201ENST00000546846 233 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 AC110588.1-201ENST00000559699 137 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.44□□□□□ -2.02
PKP4Q99569 MYL12BP1-201ENST00000569826 507 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 MIR3162-201ENST00000581818 82 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 AL159153.1-201ENST00000619688 317 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.44□□□□□ -2.02
PKP4Q99569 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.44□□□□□ -2.02
PKP4Q99569 MIR3529-201ENST00000637713 78 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 HAUS6P2-201ENST00000433254 2404 ntBASIC2.44□□□□□ -2.02
PKP4Q99569 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PKP4Q99569 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PKP4Q99569 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PKP4Q99569 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PKP4Q99569 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PKP4Q99569 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PKP4Q99569 AP000560.1-201ENST00000624150 1937 ntBASIC2.43□□□□□ -2.02
PKP4Q99569 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.43□□□□□ -2.02
PKP4Q99569 Y_RNA.27-201ENST00000362540 103 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms