Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.144-201ENST00000363521 113 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-879P-201ENST00000364328 108 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-708P-201ENST00000384217 107 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-1145P-201ENST00000384246 107 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-318P-201ENST00000384283 103 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.471-201ENST00000384312 102 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 SNORD78.2-201ENST00000391076 69 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 MIR887-201ENST00000401258 79 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 SNORA11.2-201ENST00000408318 127 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RPEP5-201ENST00000441137 268 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC073901.1-201ENST00000462471 408 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 MTATP8P1-201ENST00000467115 207 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC010469.2-201ENST00000496412 480 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 MRPS35P2-201ENST00000508242 191 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC067942.3-201ENST00000512025 362 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNA5SP356-201ENST00000515972 94 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RN7SKP132-201ENST00000516001 208 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 UBL5P4-201ENST00000562584 236 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AC125232.2-201ENST00000592457 143 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 AL670379.2-201ENST00000604983 252 ntBASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
PTCHD3Q3KNS1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 RNU1-62P-201ENST00000362599 164 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.574-201ENST00000384766 95 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MIR329-1-201ENST00000385028 80 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 SNORA46.1-201ENST00000391069 153 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MRPL35P1-201ENST00000404272 572 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC105272.1-201ENST00000438604 198 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC093023.1-201ENST00000547375 507 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 MIR5695-201ENST00000579717 85 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 AC069294.1-201ENST00000608397 350 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 7SK.10-201ENST00000621414 298 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 U6.92-201ENST00000636464 89 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 ZNF204P-201ENST00000416749 2397 ntBASIC2.74□□□□□ -1.97
PTCHD3Q3KNS1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.47-201ENST00000362697 108 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RNU1-72P-201ENST00000362976 153 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-873P-201ENST00000363833 107 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.183-201ENST00000363882 113 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.210-201ENST00000364161 110 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RPL21P1-201ENST00000399532 476 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AL590004.2-201ENST00000404787 371 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC003982.1-202ENST00000469928 248 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RPL23AP94-201ENST00000512518 302 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 SNORA25.14-201ENST00000516481 132 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-635P-201ENST00000516651 102 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC105245.1-201ENST00000581934 244 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 MIR3616-201ENST00000584070 92 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 ELOCP29-201ENST00000588193 334 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC006023.1-201ENST00000603944 259 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 RAC1P9-201ENST00000604990 392 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.772-201ENST00000606692 102 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC010999.1-201ENST00000611856 324 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC080128.1-201ENST00000474389 1917 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 AC138915.1-201ENST00000565427 1685 ntBASIC2.73□□□□□ -1.97
PTCHD3Q3KNS1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.214-201ENST00000364201 112 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 SNORD32B-201ENST00000364460 84 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 Y_RNA.439-201ENST00000384119 94 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-196P-201ENST00000384315 107 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MIR568-201ENST00000385036 95 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MIR1302-3-201ENST00000408128 138 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 CBX3P6-201ENST00000430257 527 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AL731563.1-201ENST00000442202 214 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 Z96811.1-201ENST00000445880 108 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC007395.1-201ENST00000451333 677 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC140059.1-201ENST00000489238 361 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 RNU6-897P-201ENST00000517135 105 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 COX6CP5-201ENST00000527162 228 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC090517.1-201ENST00000569307 266 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 MIR3199-1-201ENST00000582434 88 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AL713866.2-201ENST00000603579 219 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AP000942.4-201ENST00000604811 241 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AC240442.1-201ENST00000616055 283 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 AL161431.1-201ENST00000618966 4205 ntBASIC2.72□□□□□ -1.97
PTCHD3Q3KNS1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
PTCHD3Q3KNS1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
PTCHD3Q3KNS1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms