Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-1050P-201ENST00000410388 107 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-325P-201ENST00000411132 105 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.76□□□□□ -2.13
HOXC4P09017 MTCO2P12-201ENST00000427426 682 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.76□□□□□ -2.13
HOXC4P09017 AL645568.3-201ENST00000433683 316 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AC236972.2-201ENST00000434979 310 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 MTCYBP6-201ENST00000441810 138 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC4P09017 RPL30P15-201ENST00000457129 321 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AC112771.1-201ENST00000463581 102 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AC055731.1-201ENST00000474387 401 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RPL23AP63-201ENST00000498752 471 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AC093303.1-201ENST00000514549 295 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 SNORA25.11-201ENST00000515935 105 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU5B-3P-201ENST00000516601 115 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNA5SP384-201ENST00000516615 116 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU6-1016P-201ENST00000516689 94 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC4P09017 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC4P09017 AC018462.2-201ENST00000605375 395 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AC080078.3-201ENST00000605407 463 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 MIR3976-201ENST00000606807 139 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AC097372.5-201ENST00000623665 376 ntBASIC1.76□□□□□ -2.13
HOXC4P09017 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC4P09017 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HOXC4P09017 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HOXC4P09017 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
HOXC4P09017 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HOXC4P09017 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HOXC4P09017 Y_RNA.48-201ENST00000362710 103 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 RNU6-78P-201ENST00000362897 107 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 RNU6-1159P-201ENST00000362933 107 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 RNU1-72P-201ENST00000362976 153 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 SNORD42.2-201ENST00000365570 69 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 MIR95-201ENST00000385072 81 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 EDDM3CP-201ENST00000415977 425 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC4P09017 Z82205.1-201ENST00000428456 297 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC4P09017 AL161788.1-201ENST00000441805 169 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC4P09017 AC013470.1-201ENST00000453438 462 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXC4P09017 SNORD5.1-201ENST00000458800 75 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 RNU7-152P-201ENST00000458982 64 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.75□□□□□ -2.13
HOXC4P09017 RNU6-991P-201ENST00000516168 107 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 SNORA43.2-201ENST00000516652 128 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 RNU1-54P-201ENST00000517181 120 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 SNORA31.23-201ENST00000517219 133 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.75□□□□□ -2.13
HOXC4P09017 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXC4P09017 AC020661.2-201ENST00000560114 134 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 CPDP1-201ENST00000579660 283 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXC4P09017 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXC4P09017 AC019193.3-201ENST00000609144 554 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 AC096772.1-201ENST00000609146 564 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC4P09017 U4.7-201ENST00000638126 106 ntBASIC1.75□□□□□ -2.13
HOXC4P09017 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HOXC4P09017 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HOXC4P09017 Y_RNA.31-201ENST00000362574 102 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 RNU6-336P-201ENST00000364891 107 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 RNU6-308P-201ENST00000390957 107 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 FTH1P15-201ENST00000406984 280 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXC4P09017 MTCO2P27-201ENST00000420740 428 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AL358453.1-201ENST00000422522 250 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AIMP1P2-201ENST00000425294 312 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.74□□□□□ -2.13
HOXC4P09017 PCMTD1P1-201ENST00000455560 355 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 ELOCP24-201ENST00000456370 334 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 Y_RNA.653-201ENST00000459091 95 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 MIR2053-201ENST00000459295 91 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 FO393415.2-201ENST00000480085 343 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AC107032.1-201ENST00000485945 480 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 MTCYBP40-201ENST00000509390 1135 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 RNA5SP137-201ENST00000516833 135 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 SNORA48.11-201ENST00000517015 89 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXC4P09017 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXC4P09017 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.74□□□□□ -2.13
HOXC4P09017 AL080274.1-201ENST00000605565 220 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AL133215.3-201ENST00000609801 448 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AL627230.6-201ENST00000611129 280 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 AC008121.3-201ENST00000618726 433 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXC4P09017 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.74□□□□□ -2.13
HOXC4P09017 MTND4P23-201ENST00000447723 1363 ntBASIC1.73□□□□□ -2.13
HOXC4P09017 Y_RNA.187-201ENST00000363918 113 ntBASIC1.73□□□□□ -2.13
HOXC4P09017 RNU6-234P-201ENST00000365229 104 ntBASIC1.73□□□□□ -2.13
HOXC4P09017 RNU5E-7P-201ENST00000365290 117 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms