Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AL139281.1-201ENST00000422120 335 ntBASIC3.25□□□□□ -1.89
KLF4O43474 RNU7-57P-201ENST00000459540 60 ntBASIC3.25□□□□□ -1.89
KLF4O43474 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
KLF4O43474 AC021205.2-201ENST00000480069 347 ntBASIC3.25□□□□□ -1.89
KLF4O43474 SERF1AP1-201ENST00000514575 187 ntBASIC3.25□□□□□ -1.89
KLF4O43474 RN7SKP18-201ENST00000516005 275 ntBASIC3.25□□□□□ -1.89
KLF4O43474 RNU6-948P-201ENST00000516374 107 ntBASIC3.25□□□□□ -1.89
KLF4O43474 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.25□□□□□ -1.89
KLF4O43474 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.25□□□□□ -1.89
KLF4O43474 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.25□□□□□ -1.89
KLF4O43474 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.25□□□□□ -1.89
KLF4O43474 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
KLF4O43474 AC084757.4-201ENST00000616350 526 ntBASIC3.25□□□□□ -1.89
KLF4O43474 AC012314.7-201ENST00000619693 93 ntBASIC3.25□□□□□ -1.89
KLF4O43474 AC127459.3-201ENST00000624328 466 ntBASIC3.25□□□□□ -1.89
KLF4O43474 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.25□□□□□ -1.89
KLF4O43474 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
KLF4O43474 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
KLF4O43474 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
KLF4O43474 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
KLF4O43474 RNU6-743P-201ENST00000364151 106 ntBASIC3.24□□□□□ -1.89
KLF4O43474 MIR548B-201ENST00000385247 97 ntBASIC3.24□□□□□ -1.89
KLF4O43474 AC017079.2-201ENST00000416102 485 ntBASIC3.24□□□□□ -1.89
KLF4O43474 HMGN2P18-201ENST00000450680 270 ntBASIC3.24□□□□□ -1.89
KLF4O43474 SUMO1P2-201ENST00000452524 304 ntBASIC3.24□□□□□ -1.89
KLF4O43474 PRSS3P4-201ENST00000453323 162 ntBASIC3.24□□□□□ -1.89
KLF4O43474 RPS4XP2-201ENST00000458402 793 ntBASIC3.24□□□□□ -1.89
KLF4O43474 RPS29P26-201ENST00000477483 171 ntBASIC3.24□□□□□ -1.89
KLF4O43474 AC110768.1-201ENST00000509222 400 ntBASIC3.24□□□□□ -1.89
KLF4O43474 NDUFB9P3-201ENST00000521269 501 ntBASIC3.24□□□□□ -1.89
KLF4O43474 AC012433.1-201ENST00000588916 398 ntBASIC3.24□□□□□ -1.89
KLF4O43474 U3.45-201ENST00000607547 219 ntBASIC3.24□□□□□ -1.89
KLF4O43474 U4atac.1-201ENST00000618345 95 ntBASIC3.24□□□□□ -1.89
KLF4O43474 MIR1248-201ENST00000629190 106 ntBASIC3.24□□□□□ -1.89
KLF4O43474 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.24□□□□□ -1.89
KLF4O43474 AP006437.1-201ENST00000641440 3685 ntBASIC3.23□□□□□ -1.89
KLF4O43474 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLF4O43474 Y_RNA.101-201ENST00000363154 102 ntBASIC3.23□□□□□ -1.89
KLF4O43474 RNU1-23P-201ENST00000363361 144 ntBASIC3.23□□□□□ -1.89
KLF4O43474 RNU6-324P-201ENST00000363957 106 ntBASIC3.23□□□□□ -1.89
KLF4O43474 Y_RNA.286-201ENST00000364813 102 ntBASIC3.23□□□□□ -1.89
KLF4O43474 RNA5SP125-201ENST00000364843 120 ntBASIC3.23□□□□□ -1.89
KLF4O43474 Y_RNA.383-201ENST00000383855 97 ntBASIC3.23□□□□□ -1.89
KLF4O43474 MIR183-201ENST00000384958 110 ntBASIC3.23□□□□□ -1.89
KLF4O43474 ATP5A1P2-201ENST00000412323 255 ntBASIC3.23□□□□□ -1.89
KLF4O43474 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.23□□□□□ -1.89
KLF4O43474 AL137159.1-201ENST00000452808 512 ntBASIC3.23□□□□□ -1.89
KLF4O43474 AC010401.1-201ENST00000463867 348 ntBASIC3.23□□□□□ -1.89
KLF4O43474 RN7SL293P-201ENST00000481765 281 ntBASIC3.23□□□□□ -1.89
KLF4O43474 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
KLF4O43474 RNU6-1023P-201ENST00000516137 106 ntBASIC3.23□□□□□ -1.89
KLF4O43474 RNU2-27P-201ENST00000516185 142 ntBASIC3.23□□□□□ -1.89
KLF4O43474 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.23□□□□□ -1.89
KLF4O43474 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.23□□□□□ -1.89
KLF4O43474 AC004832.5-201ENST00000608677 401 ntBASIC3.23□□□□□ -1.89
KLF4O43474 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.23□□□□□ -1.89
KLF4O43474 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLF4O43474 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KLF4O43474 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.23□□□□□ -1.89
KLF4O43474 MFSD8-233ENST00000641482 4860 ntBASIC3.22□□□□□ -1.89
KLF4O43474 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KLF4O43474 Y_RNA.16-201ENST00000362421 102 ntBASIC3.22□□□□□ -1.89
KLF4O43474 RNU6-1266P-201ENST00000362794 105 ntBASIC3.22□□□□□ -1.89
KLF4O43474 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KLF4O43474 Y_RNA.416-201ENST00000384014 113 ntBASIC3.22□□□□□ -1.89
KLF4O43474 RNU6-975P-201ENST00000384296 105 ntBASIC3.22□□□□□ -1.89
KLF4O43474 Y_RNA.552-201ENST00000384665 112 ntBASIC3.22□□□□□ -1.89
KLF4O43474 MIR1185-2-201ENST00000408687 86 ntBASIC3.22□□□□□ -1.89
KLF4O43474 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.22□□□□□ -1.89
KLF4O43474 AC009238.1-201ENST00000442165 424 ntBASIC3.22□□□□□ -1.89
KLF4O43474 UBBP3-201ENST00000445497 241 ntBASIC3.22□□□□□ -1.89
KLF4O43474 AC104389.3-201ENST00000445629 235 ntBASIC3.22□□□□□ -1.89
KLF4O43474 AC009237.6-201ENST00000446969 424 ntBASIC3.22□□□□□ -1.89
KLF4O43474 AC016925.1-201ENST00000458303 298 ntBASIC3.22□□□□□ -1.89
KLF4O43474 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.22□□□□□ -1.89
KLF4O43474 ATP5EP1-201ENST00000510257 156 ntBASIC3.22□□□□□ -1.89
KLF4O43474 RNU2-34P-201ENST00000516534 121 ntBASIC3.22□□□□□ -1.89
KLF4O43474 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
KLF4O43474 RN7SKP40-201ENST00000517211 242 ntBASIC3.22□□□□□ -1.89
KLF4O43474 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.22□□□□□ -1.89
KLF4O43474 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.22□□□□□ -1.89
KLF4O43474 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.22□□□□□ -1.89
KLF4O43474 AC055872.1-201ENST00000570978 278 ntBASIC3.22□□□□□ -1.89
KLF4O43474 MIR3128-201ENST00000581957 66 ntBASIC3.22□□□□□ -1.89
KLF4O43474 AC007179.3-201ENST00000604976 235 ntBASIC3.22□□□□□ -1.89
KLF4O43474 snoZ196.1-201ENST00000625269 89 ntBASIC3.22□□□□□ -1.89
KLF4O43474 U6.105-201ENST00000637379 88 ntBASIC3.22□□□□□ -1.89
KLF4O43474 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KLF4O43474 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.22□□□□□ -1.89
KLF4O43474 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KLF4O43474 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.22□□□□□ -1.89
KLF4O43474 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KLF4O43474 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
KLF4O43474 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
KLF4O43474 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
KLF4O43474 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KLF4O43474 SNORD56.5-201ENST00000364281 72 ntBASIC3.21□□□□□ -1.9
KLF4O43474 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KLF4O43474 MIR218-2-201ENST00000385006 110 ntBASIC3.21□□□□□ -1.9
KLF4O43474 MIR34B-201ENST00000385076 84 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms