Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-91P-201ENST00000607774 107 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 uc_338.14-201ENST00000613162 166 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 AC126177.8-201ENST00000618339 1015 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 AL159153.1-201ENST00000619688 317 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 AL359854.1-201ENST00000614203 1594 ntBASIC1.81□□□□□ -2.12
HDAC3O15379 MIR369-201ENST00000362155 70 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 RNU4-76P-201ENST00000364509 141 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 RNU6-593P-201ENST00000364716 112 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 U3.13-201ENST00000364804 214 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 SNORA70B-201ENST00000384210 135 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 SNORA36A-201ENST00000384221 132 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 MIR521-1-201ENST00000384902 87 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AP000275.1-201ENST00000411943 390 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 EDDM3CP-201ENST00000415977 425 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AC243428.1-201ENST00000421099 264 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 BX276092.3-201ENST00000424182 230 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 RPL23AP95-201ENST00000426806 265 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HDAC3O15379 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.8□□□□□ -2.12
HDAC3O15379 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.8□□□□□ -2.12
HDAC3O15379 SNRPGP7-201ENST00000469016 106 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AC027575.1-201ENST00000481064 460 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 RPL36AP48-201ENST00000485521 314 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HDAC3O15379 AC093303.1-201ENST00000514549 295 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 SCARNA16.2-201ENST00000516520 172 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 RNA5SP137-201ENST00000516833 135 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 Y_RNA.708-201ENST00000516950 96 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.8□□□□□ -2.12
HDAC3O15379 AC093249.1-201ENST00000567049 203 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 MIR4765-201ENST00000585007 77 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AL158827.2-201ENST00000602494 330 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.8□□□□□ -2.12
HDAC3O15379 AC024581.2-201ENST00000619986 252 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AL691447.3-201ENST00000635020 330 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AL450472.1-202ENST00000637286 180 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 AC099654.10-201ENST00000640395 161 ntBASIC1.8□□□□□ -2.12
HDAC3O15379 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
HDAC3O15379 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HDAC3O15379 Z75746.1-201ENST00000440243 2080 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 Y_RNA.2-201ENST00000362330 96 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU6-212P-201ENST00000362642 104 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU6-1010P-201ENST00000362757 107 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU6-227P-201ENST00000362865 103 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 SNORD50.1-201ENST00000362987 71 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU6-1285P-201ENST00000363480 105 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU6-234P-201ENST00000365229 104 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU6-474P-201ENST00000384243 107 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 MIR186-201ENST00000384988 86 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU6-174P-201ENST00000410406 106 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU2-23P-201ENST00000410545 195 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 MTCO2P27-201ENST00000420740 428 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 DPH3P2-201ENST00000422618 250 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.79□□□□□ -2.12
HDAC3O15379 AC236972.2-201ENST00000434979 310 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 DAP3P1-201ENST00000441522 278 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
HDAC3O15379 AC096638.1-201ENST00000444678 216 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.79□□□□□ -2.12
HDAC3O15379 RPL39P29-201ENST00000447779 157 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.79□□□□□ -2.12
HDAC3O15379 AC079354.2-201ENST00000453523 154 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 ELOCP24-201ENST00000456370 334 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 Y_RNA.653-201ENST00000459091 95 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 MIR2053-201ENST00000459295 91 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 AC097473.1-201ENST00000508142 408 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU1-41P-201ENST00000516161 162 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 RNU1-48P-201ENST00000516400 162 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 SNORA31.16-201ENST00000516773 139 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.79□□□□□ -2.12
HDAC3O15379 CBX3P8-201ENST00000532412 525 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 AC007375.1-201ENST00000554513 578 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 MIR3945-201ENST00000581853 98 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 AC080078.3-201ENST00000605407 463 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HDAC3O15379 ZNF355P-201ENST00000427301 3216 ntBASIC1.79□□□□□ -2.12
HDAC3O15379 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HDAC3O15379 Y_RNA.31-201ENST00000362574 102 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 Y_RNA.123-201ENST00000363338 102 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 SNORD42.2-201ENST00000365570 69 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 Y_RNA.533-201ENST00000384596 114 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 SNORA40.19-201ENST00000390846 128 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 RNA5SP390-201ENST00000410191 113 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 RNU2-63P-201ENST00000410792 194 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 AC138623.1-201ENST00000418060 216 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 OOSP1P1-201ENST00000423265 274 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.78□□□□□ -2.12
HDAC3O15379 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.78□□□□□ -2.12
HDAC3O15379 AC012308.1-201ENST00000451232 178 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.78□□□□□ -2.12
HDAC3O15379 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.78□□□□□ -2.12
HDAC3O15379 U8.21-201ENST00000459536 136 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.78□□□□□ -2.12
HDAC3O15379 AL121594.1-201ENST00000475906 575 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 MRPS36P4-201ENST00000534436 298 ntBASIC1.78□□□□□ -2.12
HDAC3O15379 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.78□□□□□ -2.12
HDAC3O15379 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms