Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 PCMTD1P1-201ENST00000455560 355 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 RNA5SP490-201ENST00000517141 136 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 MIR8076-201ENST00000611401 83 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 MIR7843-201ENST00000622274 79 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 AC091932.3-201ENST00000624223 323 ntBASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
ATG4BQ9Y4P1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 Y_RNA.157-201ENST00000363638 102 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 SNORA29-201ENST00000384183 140 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-160P-201ENST00000384591 107 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 RNA5SP118-201ENST00000410385 109 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 RNA5SP494-201ENST00000410653 129 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 RNU2-41P-201ENST00000410991 178 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 EIF1P1-201ENST00000421436 341 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 BX510359.4-201ENST00000423750 193 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC130509.1-201ENST00000464158 433 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC082651.2-201ENST00000496833 166 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC005741.1-201ENST00000511094 432 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AP005660.1-201ENST00000522972 293 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 EIF4A1P12-201ENST00000551910 141 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 ANP32BP3-201ENST00000559213 706 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC090517.1-201ENST00000569307 266 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 MIR4299-201ENST00000577899 72 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 CPDP1-201ENST00000579660 283 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC243960.4-201ENST00000600532 288 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AC080078.2-201ENST00000603766 501 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 CYP2C61P-201ENST00000604072 290 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AL022345.1-201ENST00000607292 135 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AL133215.3-201ENST00000609801 448 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.8□□□□□ -2.12
ATG4BQ9Y4P1 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 RNA5SP276-201ENST00000362580 94 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC019129.1-201ENST00000403786 261 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 Y_RNA.619-201ENST00000410951 90 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-1148P-201ENST00000410992 104 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AL645568.3-201ENST00000433683 316 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AL353572.1-201ENST00000442490 417 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 NFU1P2-201ENST00000448700 469 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 MTND1P11-201ENST00000456661 876 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 RNU1-131P-201ENST00000458943 161 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 RPS29P25-201ENST00000481709 171 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 MIR3124-201ENST00000582636 67 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 MIR3935-201ENST00000583472 104 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC005296.1-201ENST00000616145 209 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 DUXAP9-208ENST00000622815 614 ntBASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
ATG4BQ9Y4P1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-1286P-201ENST00000383871 107 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 SNORD116-11-201ENST00000383882 92 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 RNU6-831P-201ENST00000384548 107 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 MIR517A-201ENST00000385001 87 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 U8.13-201ENST00000390842 128 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 RNU11-3P-201ENST00000391111 133 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 MTND4LP16-201ENST00000440828 295 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AL035666.1-201ENST00000446195 348 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 RPL23AP6-201ENST00000446637 472 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 HMGN2P18-201ENST00000450680 270 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 PMCHL2-203ENST00000457791 237 ntBASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.78□□□□□ -2.12
ATG4BQ9Y4P1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms