Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RNU6-254P-201ENST00000363377 107 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-457P-201ENST00000363999 107 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.516-201ENST00000384541 124 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-1106P-201ENST00000390845 107 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 SNORA40.19-201ENST00000390846 128 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.615-201ENST00000410769 117 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 MTCO1P21-201ENST00000416634 589 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU7-66P-201ENST00000459469 62 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 AC025465.4-201ENST00000513422 638 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 Z98751.3-201ENST00000604447 521 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 CTHRC1P1-201ENST00000605383 469 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 RMST_3.1-201ENST00000611651 109 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 AC005520.5-201ENST00000613926 164 ntBASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CDC42EP4Q9H3Q1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-227P-201ENST00000362865 103 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 RNY4P14-201ENST00000363656 96 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-743P-201ENST00000364151 106 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-1317P-201ENST00000364582 104 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.402-201ENST00000383972 102 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 SNORD14D-201ENST00000384390 87 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR29C-201ENST00000385231 88 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 SNORA67.5-201ENST00000391036 107 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AL356432.1-201ENST00000405809 419 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 BTF3P4-201ENST00000418852 495 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AC007547.1-201ENST00000462177 490 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AL163540.1-201ENST00000485382 386 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AC091435.1-201ENST00000505442 584 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.655-201ENST00000515919 96 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR449C-201ENST00000516047 92 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 ZNF519P2-201ENST00000557032 169 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AC021231.3-201ENST00000558497 370 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR3923-201ENST00000579521 83 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 CPDP1-201ENST00000579660 283 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 AC024614.3-201ENST00000637860 256 ntBASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
CDC42EP4Q9H3Q1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU1-62P-201ENST00000362599 164 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU4-56P-201ENST00000364700 142 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-378P-201ENST00000384324 107 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 MIR450B-201ENST00000401182 78 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 SNRPEP10-201ENST00000420249 274 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 USP9YP28-201ENST00000435142 589 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 NDUFA5P4-201ENST00000436704 385 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 RPL9P9-202ENST00000466501 579 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC132942.1-201ENST00000486753 483 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC021146.2-201ENST00000504736 556 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-1332P-201ENST00000516666 104 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AP005639.2-201ENST00000527592 928 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC016256.1-201ENST00000547971 354 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 CYP4A27P-201ENST00000567218 190 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC012557.2-201ENST00000605919 418 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AL773524.1-201ENST00000614065 229 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC009541.1-201ENST00000438279 2662 ntBASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDC42EP4Q9H3Q1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.9-201ENST00000362354 101 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.99-201ENST00000363138 105 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 SNORD113-7-201ENST00000363762 77 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU4-42P-201ENST00000364738 142 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-26P-201ENST00000383985 107 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-214P-201ENST00000384130 107 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 Y_RNA.450-201ENST00000384198 113 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-332P-201ENST00000391193 108 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 RNU6-325P-201ENST00000411132 105 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AL158823.1-201ENST00000418441 478 ntBASIC1.44□□□□□ -2.18
CDC42EP4Q9H3Q1 AC012306.1-201ENST00000423267 114 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms