Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU2-64P-201ENST00000411315 191 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 AL445305.1-201ENST00000432577 575 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 AC016700.2-201ENST00000446011 156 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 RNU6-1114P-201ENST00000516022 107 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 RNU1-41P-201ENST00000516161 162 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 RNU1-48P-201ENST00000516400 162 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 AC107016.2-201ENST00000547968 190 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 AC016256.1-201ENST00000547971 354 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 UBL5P4-201ENST00000562584 236 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 AC090897.2-201ENST00000581715 130 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 AL109918.3-201ENST00000603072 338 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 AL078605.1-201ENST00000603529 500 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRT40Q6A162 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT40Q6A162 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.28□□□□□ -1.88
KRT40Q6A162 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
KRT40Q6A162 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT40Q6A162 AC092593.1-201ENST00000515413 1815 ntBASIC3.28□□□□□ -1.88
KRT40Q6A162 MIR335-201ENST00000362173 94 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 RNU6-1285P-201ENST00000363480 105 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 Y_RNA.416-201ENST00000384014 113 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 RNU6-926P-201ENST00000384075 107 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 RNU6-851P-201ENST00000384565 107 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 Y_RNA.581-201ENST00000391017 97 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 MIR548I3-201ENST00000408378 149 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 MIR548I1-201ENST00000408810 149 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 RNU2-14P-201ENST00000411053 191 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT40Q6A162 RPS15AP7-201ENST00000439294 405 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 AC096638.1-201ENST00000444678 216 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT40Q6A162 AC010099.1-201ENST00000455434 375 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 snoU13.6-201ENST00000458785 104 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 AC006483.1-201ENST00000487308 313 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 AC083906.5-201ENST00000503722 328 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT40Q6A162 DEFB108E-201ENST00000524692 240 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 MIR4769-201ENST00000584126 77 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 Y_RNA.772-201ENST00000606692 102 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 MIR7843-201ENST00000622274 79 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 MIR3529-201ENST00000637713 78 ntBASIC3.27□□□□□ -1.89
KRT40Q6A162 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT40Q6A162 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRT40Q6A162 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRT40Q6A162 SNORA26.3-201ENST00000391119 136 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 RNU2-52P-201ENST00000410680 190 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 GPM6BP3-201ENST00000442797 145 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 AC091179.1-201ENST00000461606 579 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 AC003982.1-202ENST00000469928 248 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT40Q6A162 RPL30P12-201ENST00000474666 353 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 RPL26P26-201ENST00000480251 434 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.26□□□□□ -1.89
KRT40Q6A162 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.26□□□□□ -1.89
KRT40Q6A162 HMGB1P35-201ENST00000503360 598 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 RNU6-1338P-201ENST00000516328 91 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT40Q6A162 AL133393.1-201ENST00000603277 287 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 MIR6076-201ENST00000617521 113 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
KRT40Q6A162 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT40Q6A162 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT40Q6A162 HAUS6P2-201ENST00000433254 2404 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRT40Q6A162 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KRT40Q6A162 AC108206.1-201ENST00000570186 4159 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT40Q6A162 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KRT40Q6A162 AL391987.6-201ENST00000305671 199 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 SNORD27-201ENST00000363981 72 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 RNU6-879P-201ENST00000364328 108 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 Y_RNA.319-201ENST00000365138 92 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 RNU6-281P-201ENST00000384212 103 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 RNU6-1001P-201ENST00000411265 100 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT40Q6A162 AC096920.1-201ENST00000423991 241 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 WARS2P1-201ENST00000429678 537 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 AC244670.1-201ENST00000436879 112 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 AL161651.1-201ENST00000440882 223 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT40Q6A162 HSPE1P25-201ENST00000455484 251 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 AC016632.1-201ENST00000503994 196 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 RNU6-496P-201ENST00000516145 99 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 SNORA31.16-201ENST00000516773 139 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 RNU6-58P-201ENST00000517143 103 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 AC079600.2-201ENST00000550076 130 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.25□□□□□ -1.89
KRT40Q6A162 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
KRT40Q6A162 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
KRT40Q6A162 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRT40Q6A162 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 SNORD81.1-201ENST00000363064 77 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 SNORD113-8-201ENST00000363497 74 ntBASIC3.24□□□□□ -1.89
KRT40Q6A162 RNU6-338P-201ENST00000383888 105 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms