Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AC015911.1-201ENST00000495111 156 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 RPL39P5-202ENST00000512505 151 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-965P-201ENST00000516721 96 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-323P-201ENST00000521915 107 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AC025423.5-201ENST00000550230 219 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 TPRKBP2-201ENST00000565969 475 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AC026271.5-201ENST00000577873 130 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AC010525.2-201ENST00000590920 195 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AL357078.3-201ENST00000607528 618 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AL359314.1-201ENST00000616913 261 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR1248-201ENST00000629190 106 ntBASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.51□□□□□ -2.17
CDC42EP4Q9H3Q1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AC092268.1-201ENST00000342691 405 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.38-201ENST00000362617 102 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 RNY3P3-201ENST00000363816 102 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR518A2-201ENST00000384966 87 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 EIF4E2P1-201ENST00000393781 255 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AL590002.1-201ENST00000406554 418 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 MTCYBP2-201ENST00000407745 171 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 MTCO1P20-201ENST00000425366 358 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AL353689.1-201ENST00000438895 199 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AL359672.1-201ENST00000442302 409 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 RPS29P27-201ENST00000463711 170 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AC145146.1-201ENST00000496370 254 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.665-201ENST00000516177 98 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.673-201ENST00000516306 88 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-314P-201ENST00000516574 104 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 TRAV32-201ENST00000553993 340 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR4299-201ENST00000577899 72 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AC078795.3-201ENST00000602913 472 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AC004492.1-201ENST00000607036 742 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 snoU13.31-201ENST00000607291 104 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 AC104458.1-201ENST00000608243 463 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 DISC2.1-201ENST00000612827 205 ntBASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDC42EP4Q9H3Q1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 ZNF702P-202ENST00000434269 1966 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.3-201ENST00000362331 103 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU1-42P-201ENST00000364033 160 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-1090P-201ENST00000364065 94 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.256-201ENST00000364594 104 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 SNORA17.3-201ENST00000391159 129 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 SNORA12-201ENST00000391162 147 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 MRPS10P2-201ENST00000431226 381 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-1037P-201ENST00000459571 107 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 HMGN2P26-201ENST00000463169 339 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC083904.1-201ENST00000487828 231 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC008628.2-201ENST00000502605 298 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC016632.1-201ENST00000503994 196 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC092436.3-201ENST00000511788 257 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 RNU6-612P-201ENST00000516909 102 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC104576.1-201ENST00000524225 88 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC016957.1-201ENST00000534895 309 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR4781-201ENST00000585250 76 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDC42EP4Q9H3Q1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR337-201ENST00000362281 93 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 SNORA36A-201ENST00000384221 132 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 Y_RNA.554-201ENST00000384672 102 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 MIR1283-2-201ENST00000408621 87 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 RNA5SP450-201ENST00000411206 102 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 SRIP3-201ENST00000413200 219 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 AL590556.1-201ENST00000423231 483 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 C8orf59P1-201ENST00000429930 303 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 PTP4A1P4-201ENST00000512479 322 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 AC109635.3-201ENST00000529536 185 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 SCOCP1-201ENST00000554676 349 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 HSBP1P1-201ENST00000555205 166 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 AC100830.2-201ENST00000581636 240 ntBASIC1.48□□□□□ -2.17
CDC42EP4Q9H3Q1 WWP1P1-201ENST00000466609 2769 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms