Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MRPL35P1-201ENST00000404272 572 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RNU6-651P-201ENST00000411040 105 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.623-201ENST00000411128 95 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC104389.3-201ENST00000445629 235 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AL392103.1-201ENST00000447000 198 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 snoU109.2-201ENST00000459316 135 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RN7SL429P-201ENST00000479090 223 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RN7SL489P-201ENST00000486185 223 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RN7SL327P-201ENST00000488659 223 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC074198.2-201ENST00000508153 258 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC026436.1-201ENST00000510537 270 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC107393.1-201ENST00000512403 346 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 MRPS36P4-201ENST00000534436 298 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC091544.4-201ENST00000555268 342 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 MIR3910-1-201ENST00000580936 111 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 MIR3133-201ENST00000583157 78 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC010928.2-201ENST00000588017 287 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC008962.1-201ENST00000605729 304 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 AC046143.2-201ENST00000609789 160 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RN7SL853P-201ENST00000617250 223 ntBASIC2.79□□□□□ -1.96
SNHG28P0DPA3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.79□□□□□ -1.96
SNHG28P0DPA3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 RNU6-937P-201ENST00000384325 106 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 RNU6-125P-201ENST00000384505 107 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 MIR10A-201ENST00000385043 110 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 RNU6-700P-201ENST00000391043 107 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 RNU6-837P-201ENST00000391056 108 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 MIR548H3-201ENST00000408771 118 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 AC244098.2-201ENST00000422068 99 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 TMEM167AP1-201ENST00000423409 219 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 RPS12P2-201ENST00000439728 269 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 SNORA31.20-201ENST00000517111 133 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 AL590705.4-201ENST00000532209 134 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 CBX3P4-201ENST00000538909 354 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 AC060766.3-201ENST00000591442 263 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 AC127459.3-201ENST00000624328 466 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 MIR4275-201ENST00000636486 87 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 U6.104-201ENST00000637979 90 ntBASIC2.78□□□□□ -1.96
SNHG28P0DPA3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SNHG28P0DPA3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 CUL1P1-201ENST00000509510 2425 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 MIR412-201ENST00000362142 91 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-222P-201ENST00000362438 107 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-336P-201ENST00000364891 107 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-746P-201ENST00000384112 109 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 MIR301A-201ENST00000385261 86 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 SNORA40C-201ENST00000391285 128 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RPS29P13-201ENST00000402041 169 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.602-201ENST00000410535 92 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 TOMM22P6-201ENST00000465035 409 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU1-61P-201ENST00000516107 151 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-496P-201ENST00000516145 99 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-789P-201ENST00000517105 102 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 RNU6-711P-201ENST00000517255 106 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 SNORD53-201ENST00000579969 78 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 MIR3945-201ENST00000581853 98 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 MIR4435-1-201ENST00000582552 80 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 SNRPGP15-201ENST00000600149 222 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 AC240442.1-201ENST00000616055 283 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 MIR376A1-201ENST00000616574 68 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 U73479.1-201ENST00000618062 168 ntBASIC2.77□□□□□ -1.97
SNHG28P0DPA3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.77□□□□□ -1.97
SNHG28P0DPA3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 LINC02555-201ENST00000563933 1951 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.123-201ENST00000363338 102 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 U8.9-201ENST00000365667 134 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 Y_RNA.581-201ENST00000391017 97 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 SNORA3.2-201ENST00000408221 125 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 RNU4-53P-201ENST00000410828 140 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 RPL21P66-201ENST00000426566 466 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 AC104332.2-201ENST00000429959 156 ntBASIC2.76□□□□□ -1.97
SNHG28P0DPA3 HSPE1P25-201ENST00000455484 251 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms