Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR1294-201ENST00000408503 142 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-325P-201ENST00000411132 105 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AL158823.1-201ENST00000418441 478 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 SNRPEP10-201ENST00000420249 274 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC007547.1-201ENST00000462177 490 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC104564.1-201ENST00000493028 407 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC104984.5-201ENST00000586878 94 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AL078605.1-201ENST00000603529 500 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC005034.5-201ENST00000604219 466 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AP000654.2-201ENST00000605633 586 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 MIR6715A-201ENST00000615929 79 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC090617.10-201ENST00000624308 134 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 MIR3688-2-201ENST00000636963 87 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 MIR3662-201ENST00000637030 95 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
ATG4BQ9Y4P1 MIR521-1-201ENST00000384902 87 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 AL033519.2-201ENST00000403958 392 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-373P-201ENST00000411247 98 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 VN1R36P-201ENST00000414936 291 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 HMGN2P3-201ENST00000433603 273 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 HMGN2P5-201ENST00000436882 273 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 MTCYBP18-201ENST00000501056 747 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 SCOCP1-201ENST00000554676 349 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 AC109446.1-201ENST00000566172 220 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 MIR3923-201ENST00000579521 83 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 AC146944.4-201ENST00000602697 718 ntBASIC1.87□□□□□ -2.11
ATG4BQ9Y4P1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.530-201ENST00000384587 101 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 MIR1283-2-201ENST00000408621 87 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AL030996.1-201ENST00000411430 235 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AL353689.1-201ENST00000438895 199 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-991P-201ENST00000516168 107 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-567P-201ENST00000516746 107 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-273P-201ENST00000516937 96 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 MTND1P5-201ENST00000517906 940 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AC016256.1-201ENST00000547971 354 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AC021231.3-201ENST00000558497 370 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 Z98751.3-201ENST00000604447 521 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AL627230.6-201ENST00000611129 280 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 AC098679.4-201ENST00000624241 654 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 MIR1248-201ENST00000629190 106 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 SNORA43.4-201ENST00000629559 138 ntBASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ATG4BQ9Y4P1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 CENPCP1-201ENST00000533085 2578 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 Y_RNA.123-201ENST00000363338 102 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RNA5SP138-201ENST00000365098 114 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-128P-201ENST00000383976 107 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RNU6-790P-201ENST00000384479 105 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 MIR208B-201ENST00000401172 77 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AL357139.1-201ENST00000407792 426 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RNA5SP201-201ENST00000410316 124 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AC096920.1-201ENST00000423991 241 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 MTCO3P18-201ENST00000440206 761 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RNU7-187P-201ENST00000458985 68 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RNU7-66P-201ENST00000459469 62 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RPS29P27-201ENST00000463711 170 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 MTCO1P29-201ENST00000496868 288 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AC114801.2-201ENST00000503825 781 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AC021146.2-201ENST00000504736 556 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AC096745.1-201ENST00000509945 370 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 FAM206BP-201ENST00000510179 541 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 AC100830.2-201ENST00000581636 240 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RPL17P51-201ENST00000605218 238 ntBASIC1.85□□□□□ -2.11
ATG4BQ9Y4P1 RMST_6.1-201ENST00000611980 203 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms