Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.18□□□□□ -1.74
NEFMP07197 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.18□□□□□ -1.74
NEFMP07197 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.17□□□□□ -1.74
NEFMP07197 RNU6-1020P-201ENST00000363684 107 ntBASIC4.17□□□□□ -1.74
NEFMP07197 RNU6-926P-201ENST00000384075 107 ntBASIC4.17□□□□□ -1.74
NEFMP07197 RNU6-318P-201ENST00000384283 103 ntBASIC4.17□□□□□ -1.74
NEFMP07197 MIR32-201ENST00000384965 70 ntBASIC4.17□□□□□ -1.74
NEFMP07197 RPS4XP3-201ENST00000398541 413 ntBASIC4.17□□□□□ -1.74
NEFMP07197 UBA52P6-201ENST00000399822 382 ntBASIC4.17□□□□□ -1.74
NEFMP07197 RNU6-1140P-201ENST00000410517 106 ntBASIC4.17□□□□□ -1.74
NEFMP07197 RNU6-1245P-201ENST00000411130 106 ntBASIC4.17□□□□□ -1.74
NEFMP07197 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.17□□□□□ -1.74
NEFMP07197 RPL32P35-201ENST00000415214 394 ntBASIC4.17□□□□□ -1.74
NEFMP07197 COX6CP10-201ENST00000416832 224 ntBASIC4.17□□□□□ -1.74
NEFMP07197 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.17□□□□□ -1.74
NEFMP07197 MTCO1P5-201ENST00000433573 344 ntBASIC4.17□□□□□ -1.74
NEFMP07197 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.17□□□□□ -1.74
NEFMP07197 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.17□□□□□ -1.74
NEFMP07197 RNA5SP385-201ENST00000515947 110 ntBASIC4.17□□□□□ -1.74
NEFMP07197 Y_RNA.683-201ENST00000516508 93 ntBASIC4.17□□□□□ -1.74
NEFMP07197 SNORA31.26-201ENST00000517250 137 ntBASIC4.17□□□□□ -1.74
NEFMP07197 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.17□□□□□ -1.74
NEFMP07197 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.17□□□□□ -1.74
NEFMP07197 AK6P2-201ENST00000549020 471 ntBASIC4.17□□□□□ -1.74
NEFMP07197 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.17□□□□□ -1.74
NEFMP07197 MIR622-201ENST00000638396 96 ntBASIC4.17□□□□□ -1.74
NEFMP07197 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEFMP07197 AC008264.2-201ENST00000610193 3731 ntBASIC4.16□□□□□ -1.74
NEFMP07197 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.16□□□□□ -1.74
NEFMP07197 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.16□□□□□ -1.74
NEFMP07197 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEFMP07197 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEFMP07197 RNA5SP374-201ENST00000362939 125 ntBASIC4.16□□□□□ -1.74
NEFMP07197 RNY4P28-201ENST00000365281 93 ntBASIC4.16□□□□□ -1.74
NEFMP07197 SNORA7.4-201ENST00000384249 137 ntBASIC4.16□□□□□ -1.74
NEFMP07197 RNU6-21P-201ENST00000384710 107 ntBASIC4.16□□□□□ -1.74
NEFMP07197 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NEFMP07197 RPL21P3-201ENST00000395517 478 ntBASIC4.16□□□□□ -1.74
NEFMP07197 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.16□□□□□ -1.74
NEFMP07197 AC146507.2-201ENST00000460608 476 ntBASIC4.16□□□□□ -1.74
NEFMP07197 SNORA74D-201ENST00000516404 141 ntBASIC4.16□□□□□ -1.74
NEFMP07197 AC016256.1-201ENST00000547971 354 ntBASIC4.16□□□□□ -1.74
NEFMP07197 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.16□□□□□ -1.74
NEFMP07197 AL162274.2-201ENST00000614406 332 ntBASIC4.16□□□□□ -1.74
NEFMP07197 AC006111.3-201ENST00000622137 383 ntBASIC4.16□□□□□ -1.74
NEFMP07197 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.16□□□□□ -1.74
NEFMP07197 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.15□□□□□ -1.74
NEFMP07197 HAUS6P2-201ENST00000433254 2404 ntBASIC4.15□□□□□ -1.74
NEFMP07197 SNORD113-1-201ENST00000365321 69 ntBASIC4.15□□□□□ -1.75
NEFMP07197 RNU6-514P-201ENST00000384208 107 ntBASIC4.15□□□□□ -1.75
NEFMP07197 SNORD12B-201ENST00000410433 91 ntBASIC4.15□□□□□ -1.75
NEFMP07197 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.15□□□□□ -1.75
NEFMP07197 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.15□□□□□ -1.75
NEFMP07197 AC098831.1-201ENST00000440661 216 ntBASIC4.15□□□□□ -1.75
NEFMP07197 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.15□□□□□ -1.75
NEFMP07197 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.15□□□□□ -1.75
NEFMP07197 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.15□□□□□ -1.75
NEFMP07197 AP000870.1-201ENST00000472927 406 ntBASIC4.15□□□□□ -1.75
NEFMP07197 RPL30P1-201ENST00000488676 339 ntBASIC4.15□□□□□ -1.75
NEFMP07197 AC006445.1-201ENST00000491925 405 ntBASIC4.15□□□□□ -1.75
NEFMP07197 RNA5SP217-201ENST00000515959 91 ntBASIC4.15□□□□□ -1.75
NEFMP07197 RNU1-143P-201ENST00000516296 146 ntBASIC4.15□□□□□ -1.75
NEFMP07197 RNU6-861P-201ENST00000516745 106 ntBASIC4.15□□□□□ -1.75
NEFMP07197 RNU6-703P-201ENST00000516946 107 ntBASIC4.15□□□□□ -1.75
NEFMP07197 CYCSP39-201ENST00000565821 309 ntBASIC4.15□□□□□ -1.75
NEFMP07197 AL356157.2-201ENST00000605122 111 ntBASIC4.15□□□□□ -1.75
NEFMP07197 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.15□□□□□ -1.75
NEFMP07197 U1.23-201ENST00000610293 146 ntBASIC4.15□□□□□ -1.75
NEFMP07197 RNU1-68P-201ENST00000615382 146 ntBASIC4.15□□□□□ -1.75
NEFMP07197 U1.39-201ENST00000621562 146 ntBASIC4.15□□□□□ -1.75
NEFMP07197 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.15□□□□□ -1.75
NEFMP07197 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
NEFMP07197 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NEFMP07197 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEFMP07197 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.15□□□□□ -1.75
NEFMP07197 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NEFMP07197 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.14□□□□□ -1.75
NEFMP07197 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NEFMP07197 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
NEFMP07197 AC093831.2-201ENST00000624393 3427 ntBASIC4.14□□□□□ -1.75
NEFMP07197 MIR422A-201ENST00000362286 90 ntBASIC4.14□□□□□ -1.75
NEFMP07197 SNORA25.1-201ENST00000362326 128 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RNU6-1159P-201ENST00000362933 107 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RNU6-740P-201ENST00000364734 105 ntBASIC4.14□□□□□ -1.75
NEFMP07197 Y_RNA.292-201ENST00000364904 97 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RNU6-142P-201ENST00000384019 107 ntBASIC4.14□□□□□ -1.75
NEFMP07197 Y_RNA.569-201ENST00000384749 103 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RNA5SP213-201ENST00000391031 106 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.14□□□□□ -1.75
NEFMP07197 AL390729.2-201ENST00000416137 156 ntBASIC4.14□□□□□ -1.75
NEFMP07197 AL606753.1-201ENST00000427435 87 ntBASIC4.14□□□□□ -1.75
NEFMP07197 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.14□□□□□ -1.75
NEFMP07197 AC096638.1-201ENST00000444678 216 ntBASIC4.14□□□□□ -1.75
NEFMP07197 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.14□□□□□ -1.75
NEFMP07197 AC087477.1-201ENST00000465747 340 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RPL27AP5-201ENST00000469428 449 ntBASIC4.14□□□□□ -1.75
NEFMP07197 AF186996.7-201ENST00000492781 209 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RNU6-1278P-201ENST00000516130 107 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RN7SKP49-201ENST00000516675 260 ntBASIC4.14□□□□□ -1.75
NEFMP07197 RNU6-1183P-201ENST00000517054 60 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms