Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 SNRPGP20-201ENST00000604477 205 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 PCGEM1.1-201ENST00000613431 131 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.41□□□□□ -1.86
NPHS1O60500 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPHS1O60500 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPHS1O60500 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHS1O60500 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NPHS1O60500 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHS1O60500 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.4□□□□□ -1.86
NPHS1O60500 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPHS1O60500 RNU1-62P-201ENST00000362599 164 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 SNORA18.3-201ENST00000384122 132 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 RNA5SP201-201ENST00000410316 124 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 RNU6-1199P-201ENST00000411249 104 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.4□□□□□ -1.87
NPHS1O60500 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 snoU13.14-201ENST00000459372 104 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 AP001324.2-201ENST00000461163 319 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.4□□□□□ -1.87
NPHS1O60500 RNU6-861P-201ENST00000516745 106 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 RNU6-255P-201ENST00000516957 105 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.4□□□□□ -1.87
NPHS1O60500 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 MIR3145-201ENST00000580727 82 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 AC012493.2-201ENST00000595083 291 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 AL391813.1-201ENST00000603098 260 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 AC005828.6-201ENST00000606610 232 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 MIR6810-201ENST00000622701 70 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 AC018692.3-201ENST00000623929 123 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPHS1O60500 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.4□□□□□ -1.87
NPHS1O60500 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.87
NPHS1O60500 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPHS1O60500 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPHS1O60500 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHS1O60500 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHS1O60500 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHS1O60500 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NPHS1O60500 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPHS1O60500 RNU4-15P-201ENST00000362613 141 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 RNU6-1020P-201ENST00000363684 107 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 Y_RNA.464-201ENST00000384282 110 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 RNU6-628P-201ENST00000410675 107 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 AC096649.2-201ENST00000416186 393 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 AC091390.1-201ENST00000433904 331 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 AL121594.1-201ENST00000475906 575 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.39□□□□□ -1.87
NPHS1O60500 AC074198.2-201ENST00000508153 258 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 MIR4697-201ENST00000582977 78 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.39□□□□□ -1.87
NPHS1O60500 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPHS1O60500 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPHS1O60500 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHS1O60500 AC092593.1-201ENST00000515413 1815 ntBASIC3.39□□□□□ -1.87
NPHS1O60500 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
NPHS1O60500 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NPHS1O60500 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHS1O60500 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHS1O60500 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHS1O60500 SNORD9-201ENST00000362566 104 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 RNU4-80P-201ENST00000363200 141 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 RNU1-101P-201ENST00000391171 127 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 MIR320B2-201ENST00000408479 138 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHS1O60500 AL031183.1-201ENST00000457667 207 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 SNORD2.1-201ENST00000458762 69 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 AC112771.1-201ENST00000463581 102 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 RN7SL132P-201ENST00000478131 296 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.38□□□□□ -1.87
NPHS1O60500 AC108043.1-201ENST00000512696 574 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 RNU6-155P-201ENST00000516347 100 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHS1O60500 AC025281.1-201ENST00000567026 265 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.38□□□□□ -1.87
NPHS1O60500 AC010620.2-201ENST00000600135 313 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHS1O60500 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPHS1O60500 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
NPHS1O60500 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.38□□□□□ -1.87
NPHS1O60500 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.38□□□□□ -1.87
NPHS1O60500 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPHS1O60500 Y_RNA.217-201ENST00000364214 105 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 Y_RNA.415-201ENST00000384012 112 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 MIR186-201ENST00000384988 86 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 AC004866.1-201ENST00000411748 78 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHS1O60500 AC126124.2-201ENST00000413542 321 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 AC027124.2-201ENST00000428249 105 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 Y_RNA.641-201ENST00000459414 105 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 RNY3P16-201ENST00000516338 101 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 RNU6-406P-201ENST00000516470 107 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 RN7SKP21-201ENST00000516503 220 ntBASIC3.37□□□□□ -1.87
NPHS1O60500 SNORA31.21-201ENST00000517180 77 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms