Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AC007395.1-201ENST00000451333 677 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 RPS29P15-201ENST00000458329 171 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 RNA5SP269-201ENST00000459032 137 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 RNU7-14P-201ENST00000459331 62 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 HMGN2P9-201ENST00000476875 229 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AC079140.5-201ENST00000507882 310 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AC079140.3-201ENST00000511111 550 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AL161670.1-201ENST00000554348 137 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 CYP4A27P-201ENST00000567218 190 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AC234772.3-201ENST00000602277 528 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 Z98751.3-201ENST00000604447 521 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AC009994.1-201ENST00000606889 253 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AL512598.1-201ENST00000610158 273 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AC083806.3-201ENST00000614016 455 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 AP001506.1-201ENST00000615444 211 ntBASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCNB1IP1Q9NPC3 RNU6-862P-201ENST00000362804 105 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-552P-201ENST00000362869 119 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU4-48P-201ENST00000365559 182 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 U8.10-201ENST00000384260 133 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORD70.1-201ENST00000391007 85 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RPL31P35-201ENST00000431058 377 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 snoU13.30-201ENST00000458951 104 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 GMFBP1-201ENST00000467831 427 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RPL30P7-201ENST00000479312 323 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 MTND1P22-201ENST00000510572 951 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RNA5SP481-201ENST00000516814 122 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 RN7SKP219-201ENST00000516825 296 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AP003465.2-201ENST00000602571 373 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 MIR98-201ENST00000606724 119 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AL078604.3-201ENST00000615580 211 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 AC079248.2-201ENST00000623779 326 ntBASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-827P-201ENST00000365553 106 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AL117342.1-201ENST00000404861 406 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 ARL5AP1-201ENST00000418991 388 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AL135790.2-201ENST00000437701 267 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AL033528.1-201ENST00000453780 140 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 RN7SKP210-201ENST00000459176 261 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC008628.2-201ENST00000502605 298 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AK3P2-201ENST00000507976 429 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC091874.1-201ENST00000511402 339 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-567P-201ENST00000516746 107 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AP001372.4-201ENST00000524889 472 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC084364.2-201ENST00000546924 395 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 RRN3P3-201ENST00000549207 578 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC103996.1-201ENST00000555468 102 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC021231.3-201ENST00000558497 370 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AP001836.1-201ENST00000604675 523 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 AC002044.1-201ENST00000606707 158 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORA43.4-201ENST00000629559 138 ntBASIC1.2□□□□□ -2.22
CCNB1IP1Q9NPC3 ZNF72P-201ENST00000425869 1908 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 RNA5SP99-201ENST00000364020 114 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-553P-201ENST00000364047 96 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-266P-201ENST00000364225 107 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 SNORA40.3-201ENST00000390964 122 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 AL031274.1-201ENST00000450334 232 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 AL133217.1-201ENST00000450980 425 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 AC009474.2-201ENST00000451383 136 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 RN7SKP265-201ENST00000516448 223 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 RNU6-856P-201ENST00000516959 98 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 RAB11AP2-201ENST00000545905 639 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 AC109446.2-201ENST00000567872 497 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 AGGF1P4-201ENST00000568249 801 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 AL050303.3-201ENST00000613704 284 ntBASIC1.19□□□□□ -2.22
CCNB1IP1Q9NPC3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms