Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 GOT2P5-201ENST00000433995 546 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 IFNA11P-201ENST00000446352 526 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 SNORD2.1-201ENST00000458762 69 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC109925.1-201ENST00000478069 331 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC103975.1-201ENST00000482506 483 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC074198.2-201ENST00000508153 258 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC008011.1-201ENST00000545989 227 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 MIR3133-201ENST00000583157 78 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 MIR3158-1-201ENST00000583596 81 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 SNRPGP20-201ENST00000604477 205 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RNU1-30P-201ENST00000606575 163 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC004467.1-201ENST00000615678 330 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC068831.7-201ENST00000616954 363 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC073349.3-201ENST00000617616 186 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC039056.2-201ENST00000622261 511 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC092628.2-201ENST00000622492 339 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC091932.3-201ENST00000624223 323 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 U6.98-201ENST00000637157 84 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 AC010889.1-201ENST00000566193 2666 ntBASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTCHD1Q96NR3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AC092593.1-201ENST00000515413 1815 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 SNORA18.3-201ENST00000384122 132 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 MIR147B-201ENST00000390185 80 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 RNA5SP38-201ENST00000410750 119 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AC009237.7-201ENST00000447357 229 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AL121594.1-201ENST00000475906 575 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AC005828.6-201ENST00000606610 232 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AC069200.1-201ENST00000609511 323 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AC006133.1-201ENST00000617106 264 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
PTCHD1Q96NR3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
PTCHD1Q96NR3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.46□□□□□ -1.85
PTCHD1Q96NR3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 SNORD114-19-201ENST00000363072 75 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 RNU6-187P-201ENST00000384139 106 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.597-201ENST00000410463 100 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 SNORA67.7-201ENST00000516664 135 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.703-201ENST00000516846 111 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 RN7SKP209-201ENST00000516888 304 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AC012493.2-201ENST00000595083 291 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AL137843.1-201ENST00000605078 385 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AC006111.3-201ENST00000622137 383 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AC012442.3-202ENST00000636742 206 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AP000553.6-201ENST00000641242 118 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 AL021368.2-201ENST00000606125 5352 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 MFSD8-236ENST00000641509 4050 ntBASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PTCHD1Q96NR3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 RNU4-80P-201ENST00000363200 141 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.217-201ENST00000364214 105 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 RNA5SP51-201ENST00000364750 119 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 SNORA5A-201ENST00000384111 134 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 MIR23B-201ENST00000384832 97 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 RNU6-1199P-201ENST00000411249 104 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 snoU13.14-201ENST00000459372 104 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 Y_RNA.641-201ENST00000459414 105 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 RN7SL93P-201ENST00000463035 293 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 RN7SKP18-201ENST00000516005 275 ntBASIC3.45□□□□□ -1.86
PTCHD1Q96NR3 RNU6-155P-201ENST00000516347 100 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms