Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AL157871.3-201ENST00000557231 293 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AL390123.1-201ENST00000603216 237 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AC009314.1-201ENST00000603871 304 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AC004792.1-201ENST00000614523 137 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AL138825.1-201ENST00000618587 192 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 OR4G2P-202ENST00000641004 1759 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 ZNF299P-201ENST00000406845 1804 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AC093908.1-201ENST00000623125 8092 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 RNU6-428P-201ENST00000362942 107 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.277-201ENST00000364754 102 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.555-201ENST00000384673 110 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 MIR521-1-201ENST00000384902 87 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 SNORA69.1-201ENST00000390904 137 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 SNORD115-46-201ENST00000390982 71 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 RNU6-493P-201ENST00000391321 108 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 MTCO2P33-201ENST00000402100 465 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AL139156.1-201ENST00000412785 841 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AL117339.3-201ENST00000418733 162 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 SDAD1P3-201ENST00000427380 333 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AC087588.1-201ENST00000462203 316 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 RPS26P21-201ENST00000475397 348 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AC067942.3-201ENST00000512025 362 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 RNU5B-3P-201ENST00000516601 115 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 SNORA81.3-201ENST00000517283 198 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 DEFB108E-201ENST00000524692 240 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AC103810.6-201ENST00000606708 136 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AC009318.2-201ENST00000610917 651 ntBASIC2.85□□□□□ -1.95
SNHG28P0DPA3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNHG28P0DPA3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SNHG28P0DPA3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SNHG28P0DPA3 RNY1-201ENST00000364228 113 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 SNORD14B-201ENST00000364533 90 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 RNU6-1074P-201ENST00000383995 104 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 RNU6-102P-201ENST00000384485 104 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.84□□□□□ -1.95
SNHG28P0DPA3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 AL513331.1-201ENST00000411908 397 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 Z85995.1-201ENST00000415547 335 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 HMGB1P27-201ENST00000431429 603 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 AC004383.1-201ENST00000438135 289 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.84□□□□□ -1.95
SNHG28P0DPA3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.84□□□□□ -1.95
SNHG28P0DPA3 RNA5SP385-201ENST00000515947 110 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 AC144568.1-201ENST00000520139 137 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.84□□□□□ -1.95
SNHG28P0DPA3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 MIR6733-201ENST00000635723 61 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 U6.92-201ENST00000636464 89 ntBASIC2.84□□□□□ -1.95
SNHG28P0DPA3 MTND5P9-201ENST00000503854 1755 ntBASIC2.84□□□□□ -1.96
SNHG28P0DPA3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.84□□□□□ -1.96
SNHG28P0DPA3 AC069528.2-201ENST00000624849 1991 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 RNU6-886P-201ENST00000384319 105 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 Y_RNA.478-201ENST00000384358 107 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 MIR514A1-201ENST00000385133 98 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 FABP5P15-201ENST00000453566 214 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 SNORA31.26-201ENST00000517250 137 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 MIR4300-201ENST00000581016 96 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 MIR1291-201ENST00000627649 87 ntBASIC2.83□□□□□ -1.96
SNHG28P0DPA3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SNHG28P0DPA3 Z75746.1-201ENST00000440243 2080 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms