Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC018462.2-201ENST00000605375 395 ntBASIC2.48□□□□□ -2.01
LRRC53A6NM62 AC016727.1-205ENST00000605437 569 ntBASIC2.48□□□□□ -2.01
LRRC53A6NM62 AC008121.3-201ENST00000618726 433 ntBASIC2.48□□□□□ -2.01
LRRC53A6NM62 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.48□□□□□ -2.01
LRRC53A6NM62 MIR6766-201ENST00000622641 72 ntBASIC2.48□□□□□ -2.01
LRRC53A6NM62 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LRRC53A6NM62 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
LRRC53A6NM62 RNU1-23P-201ENST00000363361 144 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 RNA5SP240-201ENST00000365355 128 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 RNU6-1286P-201ENST00000383871 107 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 RNU6-968P-201ENST00000384076 107 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 Y_RNA.482-201ENST00000384377 111 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 AC018634.1-201ENST00000437554 401 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.47□□□□□ -2.01
LRRC53A6NM62 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.47□□□□□ -2.01
LRRC53A6NM62 snoU13.6-201ENST00000458785 104 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.47□□□□□ -2.01
LRRC53A6NM62 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 AC109446.1-201ENST00000566172 220 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 AC011494.1-201ENST00000596454 237 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.47□□□□□ -2.01
LRRC53A6NM62 AC009318.2-201ENST00000610917 651 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 AL359757.2-201ENST00000624309 274 ntBASIC2.47□□□□□ -2.01
LRRC53A6NM62 RNU5B-2P-201ENST00000363036 113 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 RNU6-593P-201ENST00000364716 112 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 MIR29B2-201ENST00000385055 81 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 RNU6-1009P-201ENST00000390996 107 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 SNORA12-201ENST00000391162 147 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 Y_RNA.594-201ENST00000410373 140 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 RNU6-1050P-201ENST00000410388 107 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 RNU6-174P-201ENST00000410406 106 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 Y_RNA.597-201ENST00000410463 100 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 NCOR1P3-201ENST00000420479 303 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC012306.1-201ENST00000423267 114 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC107222.1-201ENST00000510899 637 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC005741.1-201ENST00000511094 432 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 Y_RNA.670-201ENST00000516255 105 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 PRELID2P1-201ENST00000552837 301 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 MIR3923-201ENST00000579521 83 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 MIR5194-201ENST00000582634 120 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC006023.1-201ENST00000603944 259 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC099654.5-201ENST00000636479 350 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LRRC53A6NM62 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LRRC53A6NM62 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.46□□□□□ -2.02
LRRC53A6NM62 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.46□□□□□ -2.02
LRRC53A6NM62 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.02
LRRC53A6NM62 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LRRC53A6NM62 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LRRC53A6NM62 RNU4-56P-201ENST00000364700 142 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 RNU6-596P-201ENST00000365395 98 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LRRC53A6NM62 SNORA46.1-201ENST00000391069 153 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 EIF4EP2-201ENST00000422816 654 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.45□□□□□ -2.02
LRRC53A6NM62 AL513124.1-201ENST00000450410 614 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 Y_RNA.635-201ENST00000459041 101 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.45□□□□□ -2.02
LRRC53A6NM62 AF186996.7-201ENST00000492781 209 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 RNU6-277P-201ENST00000516272 106 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 SNORA48.11-201ENST00000517015 89 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 AC016256.1-201ENST00000547971 354 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.45□□□□□ -2.02
LRRC53A6NM62 MIR4273-201ENST00000582824 84 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.45□□□□□ -2.02
LRRC53A6NM62 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 AL132765.2-201ENST00000610812 351 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 Y_RNA.804-201ENST00000615262 101 ntBASIC2.45□□□□□ -2.02
LRRC53A6NM62 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LRRC53A6NM62 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LRRC53A6NM62 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 MTND5P9-201ENST00000503854 1755 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 MIRLET7G-201ENST00000362280 84 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 Y_RNA.48-201ENST00000362710 103 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 SNORA5B-201ENST00000363786 132 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 RNU6-378P-201ENST00000384324 107 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 Y_RNA.533-201ENST00000384596 114 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 MTCYBP2-201ENST00000407745 171 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 RNA5SP201-201ENST00000410316 124 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 RNU6-1304P-201ENST00000411374 106 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 AL590556.1-201ENST00000423231 483 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC093019.1-201ENST00000443135 252 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AL353705.4-201ENST00000449661 238 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 RPL7P42-201ENST00000481005 679 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 AC104435.1-201ENST00000483483 166 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 RPL23AP75-201ENST00000491601 451 ntBASIC2.44□□□□□ -2.02
LRRC53A6NM62 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms