Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-4P-201ENST00000384205 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-5P-201ENST00000384238 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-3P-201ENST00000384314 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-16P-201ENST00000384385 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-15P-201ENST00000384534 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-2-201ENST00000384627 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-29P-201ENST00000384637 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-9-201ENST00000384776 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-33P-201ENST00000384793 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-510P-201ENST00000391239 108 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 MIR450B-201ENST00000401182 78 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RN7SKP32-201ENST00000410167 303 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RN7SKP158-201ENST00000410453 326 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 AL590632.1-201ENST00000424289 371 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 MTND3P23-201ENST00000431980 347 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 NDUFA5P4-201ENST00000436704 385 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 HMGB1P18-201ENST00000438801 619 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 HIGD1AP2-201ENST00000446367 280 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 MTND1P11-201ENST00000456661 876 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.98□□□□□ -2.09
HDAC3O15379 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-277P-201ENST00000516272 106 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-256P-201ENST00000516747 97 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 SNORA31.25-201ENST00000517242 134 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.98□□□□□ -2.09
HDAC3O15379 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.98□□□□□ -2.09
HDAC3O15379 AL121821.2-201ENST00000556081 394 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 AC012493.3-201ENST00000604494 112 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 RNU6-6P-201ENST00000606623 107 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.98□□□□□ -2.09
HDAC3O15379 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.98□□□□□ -2.09
HDAC3O15379 AL359697.1-201ENST00000624879 587 ntBASIC1.98□□□□□ -2.09
HDAC3O15379 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HDAC3O15379 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HDAC3O15379 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HDAC3O15379 RNU6-78P-201ENST00000362897 107 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 RNU6-797P-201ENST00000363101 109 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 RNU4-73P-201ENST00000363164 141 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HDAC3O15379 Y_RNA.474-201ENST00000384341 102 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 Y_RNA.480-201ENST00000384364 102 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 Y_RNA.509-201ENST00000384506 99 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 MIR147B-201ENST00000390185 80 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 FTH1P15-201ENST00000406984 280 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 RAP1BP3-201ENST00000407180 549 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 RNU4-14P-201ENST00000410858 122 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.97□□□□□ -2.09
HDAC3O15379 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.97□□□□□ -2.09
HDAC3O15379 VN1R36P-201ENST00000414936 291 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.97□□□□□ -2.09
HDAC3O15379 AC093019.1-201ENST00000443135 252 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 RPL32P28-201ENST00000443577 397 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.97□□□□□ -2.09
HDAC3O15379 BTF3P15-201ENST00000455606 336 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HDAC3O15379 Y_RNA.682-201ENST00000516457 100 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 RNU6-1332P-201ENST00000516666 104 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HDAC3O15379 RNU6-323P-201ENST00000521915 107 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.97□□□□□ -2.09
HDAC3O15379 COPS8P3-201ENST00000526024 482 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 AC025423.5-201ENST00000550230 219 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 LINC00933-203ENST00000559812 219 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
HDAC3O15379 RNU6-85P-201ENST00000605989 107 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 AC009233.1-201ENST00000616477 371 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 RMST_7.1-201ENST00000621935 268 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.97□□□□□ -2.09
HDAC3O15379 ADAM3A-203ENST00000461344 2157 ntBASIC1.97□□□□□ -2.09
HDAC3O15379 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.58-201ENST00000362807 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.61-201ENST00000362835 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.135-201ENST00000363439 95 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.154-201ENST00000363624 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 SNORD113-7-201ENST00000363762 77 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.212-201ENST00000364177 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 RNU1-91P-201ENST00000364746 163 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 RNY3P1-201ENST00000365085 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.339-201ENST00000365325 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 RNY3-201ENST00000365484 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.490-201ENST00000384413 102 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 MIR548F5-201ENST00000408421 86 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 SNORD56-201ENST00000413522 71 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AC027124.2-201ENST00000428249 105 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AL365400.1-201ENST00000431854 640 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.96□□□□□ -2.1
HDAC3O15379 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.96□□□□□ -2.1
HDAC3O15379 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.96□□□□□ -2.1
HDAC3O15379 AC080013.2-201ENST00000460866 323 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.96□□□□□ -2.1
HDAC3O15379 MTND3P22-201ENST00000510932 243 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 Y_RNA.691-201ENST00000516611 103 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.96□□□□□ -2.1
HDAC3O15379 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.96□□□□□ -2.1
HDAC3O15379 AP005639.2-201ENST00000527592 928 ntBASIC1.96□□□□□ -2.1
HDAC3O15379 CYCSP27-201ENST00000527643 293 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 192.9 ms