Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL27AP5-201ENST00000469428 449 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 AC079598.5-201ENST00000547460 117 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 EIF4A1P12-201ENST00000551910 141 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 MIR5680-201ENST00000577577 84 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 KLKP1-201ENST00000595979 403 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 SNORA62.6-201ENST00000606322 83 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 AC013412.1-201ENST00000610687 192 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 AL359854.1-201ENST00000614203 1594 ntBASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM88BA6NKF7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TMEM88BA6NKF7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
TMEM88BA6NKF7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
TMEM88BA6NKF7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 RNU6-1175P-201ENST00000365200 107 ntBASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 RNU6-338P-201ENST00000383888 105 ntBASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 RPL7P47-201ENST00000497299 556 ntBASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 RNU6-182P-201ENST00000516970 105 ntBASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 AC009779.6-201ENST00000603972 165 ntBASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 PCGEM1.1-201ENST00000613431 131 ntBASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM88BA6NKF7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 RNU6-102P-201ENST00000384485 104 ntBASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 RNU4-30P-201ENST00000410245 143 ntBASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 AIMP1P2-201ENST00000425294 312 ntBASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM88BA6NKF7 AC069528.2-201ENST00000624849 1991 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 Y_RNA.44-201ENST00000362676 108 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 Y_RNA.277-201ENST00000364754 102 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 RNU6-378P-201ENST00000384324 107 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 SNORA46.1-201ENST00000391069 153 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 RNA5SP201-201ENST00000410316 124 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 RNU2-64P-201ENST00000411315 191 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 POLR2KP2-201ENST00000438155 177 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 IFNA11P-201ENST00000446352 526 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AC005042.3-201ENST00000453230 174 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AL121594.1-201ENST00000475906 575 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AC103975.1-201ENST00000482506 483 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 RPS27P26-201ENST00000494583 239 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 RNA5SP112-201ENST00000515937 99 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 RNA5SP341-201ENST00000516261 117 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 SNORA70.18-201ENST00000516696 98 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AC018448.1-201ENST00000552843 316 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 MIR5004-201ENST00000579078 107 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 RPL17P51-201ENST00000605218 238 ntBASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM88BA6NKF7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 Y_RNA.117-201ENST00000363294 101 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 RNU6-799P-201ENST00000363567 107 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 SNORA5B-201ENST00000363786 132 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 RNU6-961P-201ENST00000363893 105 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 Y_RNA.331-201ENST00000365267 102 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 RNU6-1083P-201ENST00000384022 107 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 MIR591-201ENST00000385290 95 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 SNORD58.1-201ENST00000391313 66 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AC097463.2-201ENST00000421074 142 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AC006028.1-201ENST00000438379 402 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 U3.44-201ENST00000458938 192 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AC091179.1-201ENST00000461606 579 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AC093663.1-201ENST00000497190 394 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 RNU6-138P-201ENST00000515952 107 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 SNORA70.14-201ENST00000516205 110 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 MIR4765-201ENST00000585007 77 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 MZT1P2-201ENST00000604387 248 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 MIR7106-201ENST00000612419 65 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 AC005562.2-201ENST00000618264 111 ntBASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM88BA6NKF7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms