Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC068792.1-201ENST00000621354 417 ntBASIC1.67□□□□□ -2.14
CDC42EP4Q9H3Q1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.67□□□□□ -2.14
CDC42EP4Q9H3Q1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CDC42EP4Q9H3Q1 RNU6-266P-201ENST00000364225 107 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 Y_RNA.255-201ENST00000364581 97 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 RN7SKP101-201ENST00000411376 320 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 SNORD56-201ENST00000413522 71 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AIMP1P2-201ENST00000425294 312 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AL161788.1-201ENST00000441805 169 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC012308.1-201ENST00000451232 178 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC013470.1-201ENST00000453438 462 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 RNU7-167P-201ENST00000459160 62 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AL121594.1-201ENST00000475906 575 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 RNU2-53P-201ENST00000516257 147 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC104383.1-201ENST00000530297 370 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC022880.1-201ENST00000534017 973 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC093249.1-201ENST00000567049 203 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC097065.2-201ENST00000608159 533 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AL627230.6-201ENST00000611129 280 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 AC139792.3-201ENST00000623525 224 ntBASIC1.66□□□□□ -2.14
CDC42EP4Q9H3Q1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
CDC42EP4Q9H3Q1 RNU6-105P-201ENST00000363909 104 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 Y_RNA.409-201ENST00000383990 98 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU6-1032P-201ENST00000384100 107 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 Y_RNA.559-201ENST00000384686 107 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU2-63P-201ENST00000410792 194 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC083798.1-201ENST00000472671 131 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 SNORA48.11-201ENST00000517015 89 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC090115.3-201ENST00000553218 849 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC004223.2-201ENST00000590309 544 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AL109918.3-201ENST00000603072 338 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AL136363.2-201ENST00000604173 851 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC016727.1-205ENST00000605437 569 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC103591.3-201ENST00000608684 209 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 uc_338.34-201ENST00000617467 174 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AC124864.2-201ENST00000624736 186 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 OR5AK4P-201ENST00000635912 903 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 MIR6863-201ENST00000636112 90 ntBASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDC42EP4Q9H3Q1 MTND4P14-201ENST00000435799 1354 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU4-75P-201ENST00000364621 146 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 RNA5SP240-201ENST00000365355 128 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 SNORA40.18-201ENST00000391200 128 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 CALM2P3-201ENST00000400429 449 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL591034.2-201ENST00000402839 359 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL117339.3-201ENST00000418733 162 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC016907.1-201ENST00000419483 435 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 CYP2C59P-201ENST00000457790 269 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC087884.1-201ENST00000469738 328 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC055731.1-201ENST00000474387 401 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC018868.1-201ENST00000491307 315 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 SNORA31.25-201ENST00000517242 134 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 COPS8P3-201ENST00000526024 482 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 IMMP1LP2-201ENST00000552954 492 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 MIR3941-201ENST00000582572 103 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AP000942.3-201ENST00000603702 160 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL355297.2-201ENST00000604792 129 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 HULC.1-201ENST00000612720 240 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC093783.1-201ENST00000612976 329 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL158209.2-201ENST00000619266 216 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AL359880.1-201ENST00000621879 266 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 AC097372.5-201ENST00000623665 376 ntBASIC1.64□□□□□ -2.15
CDC42EP4Q9H3Q1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU6-655P-201ENST00000362858 107 ntBASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU1-17P-201ENST00000363022 152 ntBASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU1-23P-201ENST00000363361 144 ntBASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU6-1210P-201ENST00000363775 107 ntBASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 RNU6-336P-201ENST00000364891 107 ntBASIC1.63□□□□□ -2.15
CDC42EP4Q9H3Q1 MTCO3P40-201ENST00000392516 676 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 483 ms