Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 TUSC7.1-201ENST00000610969 165 ntBASIC1.18□□□□□ -2.22
SHANK3Q9BYB0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.18□□□□□ -2.22
SHANK3Q9BYB0 AC093648.1-201ENST00000623546 606 ntBASIC1.18□□□□□ -2.22
SHANK3Q9BYB0 SNORA25B-201ENST00000365507 128 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 Y_RNA.608-201ENST00000410647 95 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC016831.2-201ENST00000417179 352 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC098592.1-201ENST00000419352 333 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 ELOCP4-201ENST00000420090 333 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC096920.1-201ENST00000423991 241 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC004941.2-201ENST00000427009 228 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 MTND6P13-201ENST00000443510 523 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 RPL30P1-201ENST00000488676 339 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC010587.1-201ENST00000505809 469 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 MTND2P33-201ENST00000506452 1031 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC005771.1-201ENST00000585581 349 ntBASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.17□□□□□ -2.22
SHANK3Q9BYB0 MIR126-201ENST00000362291 85 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RNU6-500P-201ENST00000362349 107 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RNU6-1214P-201ENST00000363650 109 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RNY4P16-201ENST00000364768 94 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RNU6-611P-201ENST00000384276 104 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 MIR513B-201ENST00000385136 84 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RNU11-3P-201ENST00000391111 133 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RPL23AP32-201ENST00000395315 459 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RNU2-48P-201ENST00000410694 191 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 AC119618.1-201ENST00000434191 222 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 RPS24P1-201ENST00000438550 371 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 BNIP3P6-201ENST00000549284 499 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 MIR4713-201ENST00000582691 75 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 BNIP3P30-201ENST00000601184 574 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 AP000860.1-201ENST00000605250 559 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 AC087588.2-201ENST00000617667 426 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 AC090517.3-201ENST00000625170 141 ntBASIC1.16□□□□□ -2.22
SHANK3Q9BYB0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 RNU1-58P-201ENST00000362413 163 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 Y_RNA.167-201ENST00000363735 109 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 RNU6-61P-201ENST00000365528 109 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 Y_RNA.412-201ENST00000384001 104 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 RAP1BP3-201ENST00000407180 549 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AL356583.2-201ENST00000426536 280 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC079140.5-201ENST00000507882 310 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC112206.3-201ENST00000514578 389 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 SNORA4.4-201ENST00000515921 135 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 OR5B19P-201ENST00000531766 928 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 OR5AL2P-201ENST00000532185 920 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC018630.3-201ENST00000542637 96 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC093249.1-201ENST00000567049 203 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 NDUFA8P1-201ENST00000605525 367 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AL022345.1-201ENST00000607292 135 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 AC012409.4-201ENST00000612923 249 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 U1.36-201ENST00000620684 176 ntBASIC1.15□□□□□ -2.22
SHANK3Q9BYB0 MTND4P4-201ENST00000439033 1366 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 OR4G2P-201ENST00000328113 903 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 RNU6-1179P-201ENST00000384667 107 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 MIR518A2-201ENST00000384966 87 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AL133475.1-201ENST00000404414 305 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 RPL21P90-201ENST00000415692 466 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 snoU109.2-201ENST00000459316 135 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 MED28P2-201ENST00000475771 317 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC018868.1-201ENST00000491307 315 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AP003122.4-201ENST00000530980 758 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC002400.1-201ENST00000569310 726 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 PRR13P7-201ENST00000605538 430 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC138749.5-201ENST00000611461 208 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC116165.2-201ENST00000616705 206 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AL132822.1-201ENST00000617063 513 ntBASIC1.15□□□□□ -2.23
SHANK3Q9BYB0 AC009541.1-201ENST00000438279 2662 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 SNORD3E-201ENST00000362899 217 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 SNORA75B-201ENST00000384053 137 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 MIR934-201ENST00000401241 83 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 RNU6-955P-201ENST00000410497 104 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 OR9R1P-201ENST00000412200 877 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 MTND4P20-201ENST00000424125 869 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.14□□□□□ -2.23
SHANK3Q9BYB0 snoU109.1-201ENST00000459339 135 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms