Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC002543.1-201ENST00000299783 1954 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 MIR410-201ENST00000362222 80 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 RNU6-545P-201ENST00000362681 104 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.122-201ENST00000363331 96 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.292-201ENST00000364904 97 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.446-201ENST00000384178 104 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 RNU6-378P-201ENST00000384324 107 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.590-201ENST00000410140 107 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 RN7SKP27-201ENST00000410684 333 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 SETP5-201ENST00000437270 562 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC091959.1-201ENST00000495857 238 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 SNORD116-28-201ENST00000516123 91 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 RNU6-406P-201ENST00000516470 107 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.683-201ENST00000516508 93 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 SCARNA14-201ENST00000516903 136 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC034105.4-201ENST00000568304 277 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 Z83818.1-201ENST00000603584 150 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 AC002076.2-201ENST00000617362 122 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCHD1Q96NR3 ZNF204P-201ENST00000416749 2397 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.464-201ENST00000384282 110 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RNU6-651P-201ENST00000411040 105 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RNU2-61P-201ENST00000411069 191 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC023141.4-201ENST00000412031 328 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RPL23AP36-201ENST00000413895 458 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AL159169.1-201ENST00000421119 127 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AL139247.1-201ENST00000422768 325 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 POLR2KP2-201ENST00000438155 177 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC007395.1-201ENST00000451333 677 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RPL23AP3-201ENST00000453844 468 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC107626.1-201ENST00000471084 183 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RPL7P49-201ENST00000471402 708 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RPL32P34-201ENST00000486380 400 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.679-201ENST00000516416 91 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RNU6-789P-201ENST00000517105 102 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC090877.1-201ENST00000561418 344 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC233702.2-202ENST00000562547 291 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 SNORD98-201ENST00000636377 67 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 MTND5P35-201ENST00000557537 1720 ntBASIC3.56□□□□□ -1.84
PTCHD1Q96NR3 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.136-201ENST00000363444 102 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.179-201ENST00000363844 90 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.383-201ENST00000383855 97 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 PTGES3P4-201ENST00000426243 356 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 MTCO1P5-201ENST00000433573 344 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 RPS15AP5-201ENST00000436276 388 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 MRPS10P1-201ENST00000448483 130 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AL500522.2-201ENST00000448562 343 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AC007215.1-201ENST00000464893 276 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 RN7SL542P-201ENST00000467147 294 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 CYCSP23-201ENST00000519781 313 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 CYP4A27P-201ENST00000567218 190 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AC105137.2-201ENST00000569073 466 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AC091152.3-201ENST00000604227 325 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 AL590240.4-201ENST00000616908 390 ntBASIC3.55□□□□□ -1.84
PTCHD1Q96NR3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 AL109809.4-201ENST00000603520 2185 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 UBE2WP1-201ENST00000362030 340 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RNU6-774P-201ENST00000363238 107 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RNU6-746P-201ENST00000384112 109 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 RNU6-19P-201ENST00000384718 107 ntBASIC3.54□□□□□ -1.84
PTCHD1Q96NR3 MIR549A-201ENST00000385268 96 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms