Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6-923P-201ENST00000364753 107 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 MIR32-201ENST00000384965 70 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 Y_RNA.580-201ENST00000391004 95 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 RPL23AP36-201ENST00000413895 458 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.7□□□□□ -1.82
EPHB3P54753 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.7□□□□□ -1.82
EPHB3P54753 AC117440.1-201ENST00000474107 571 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 RPL30P1-201ENST00000488676 339 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 AF186996.7-201ENST00000492781 209 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 RPL23AP49-201ENST00000492925 468 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 MLLT10P2-201ENST00000506434 249 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 KLKP1-201ENST00000595979 403 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.7□□□□□ -1.82
EPHB3P54753 MIR8058-201ENST00000615737 89 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 AC090132.2-201ENST00000615881 347 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.7□□□□□ -1.82
EPHB3P54753 MTND1P7-201ENST00000632801 297 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
EPHB3P54753 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
EPHB3P54753 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.7□□□□□ -1.82
EPHB3P54753 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHB3P54753 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.69□□□□□ -1.82
EPHB3P54753 AL353743.1-202ENST00000431724 1695 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
EPHB3P54753 RNU6-1290P-201ENST00000362957 109 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 Y_RNA.230-201ENST00000364348 109 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.69□□□□□ -1.82
EPHB3P54753 RNU6-741P-201ENST00000383889 107 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 RNU6-959P-201ENST00000384671 107 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 SNORD17-201ENST00000390930 237 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 RNU6-735P-201ENST00000410612 107 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.69□□□□□ -1.82
EPHB3P54753 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.69□□□□□ -1.82
EPHB3P54753 AL356867.1-201ENST00000429623 299 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.69□□□□□ -1.82
EPHB3P54753 UQCRBP2-201ENST00000447827 297 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.69□□□□□ -1.82
EPHB3P54753 AC008155.2-201ENST00000464337 397 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 RNU2-27P-201ENST00000516185 142 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 SNORA74D-201ENST00000516404 141 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 RNU6-567P-201ENST00000516746 107 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 RNA5SP165-201ENST00000517142 115 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 AP005660.1-201ENST00000522972 293 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.69□□□□□ -1.82
EPHB3P54753 ZNF192P1-203ENST00000565888 810 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 IGHVIII-44-202ENST00000636235 289 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 AC241585.2-209ENST00000638217 143 ntBASIC3.69□□□□□ -1.82
EPHB3P54753 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.68□□□□□ -1.82
EPHB3P54753 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
EPHB3P54753 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.68□□□□□ -1.82
EPHB3P54753 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EPHB3P54753 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
EPHB3P54753 U3.19-201ENST00000390893 196 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 UBA52P6-201ENST00000399822 382 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 MIR1290-201ENST00000408735 78 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 RNA5SP120-201ENST00000410900 112 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 RN7SKP53-201ENST00000411337 315 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 BX510359.1-201ENST00000456973 237 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 snoU109.2-201ENST00000459316 135 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 RN7SL807P-201ENST00000470923 297 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 RPS4XP13-201ENST00000483219 789 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 RNU6-62P-201ENST00000516526 102 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 RN7SKP289-201ENST00000517244 295 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.68□□□□□ -1.82
EPHB3P54753 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.68□□□□□ -1.82
EPHB3P54753 AC008749.1-201ENST00000597650 306 ntBASIC3.68□□□□□ -1.82
EPHB3P54753 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.68□□□□□ -1.82
EPHB3P54753 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
EPHB3P54753 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EPHB3P54753 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.68□□□□□ -1.82
EPHB3P54753 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
EPHB3P54753 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EPHB3P54753 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.67□□□□□ -1.82
EPHB3P54753 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EPHB3P54753 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EPHB3P54753 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.67□□□□□ -1.82
EPHB3P54753 MIR10B-201ENST00000385011 110 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 RNU2-68P-201ENST00000410878 191 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 RNU5E-9P-201ENST00000411164 104 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 OOSP1P1-201ENST00000423265 274 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 AC007919.1-201ENST00000429380 217 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.67□□□□□ -1.82
EPHB3P54753 AL031659.1-201ENST00000447075 539 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 SSXP4-201ENST00000451349 245 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 HMGN2P16-201ENST00000456802 261 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 SNORA40.9-201ENST00000515895 93 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 SNORA70.14-201ENST00000516205 110 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 RNY3P16-201ENST00000516338 101 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.67□□□□□ -1.82
EPHB3P54753 RPL21P9-201ENST00000556149 474 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 MED28P6-201ENST00000558776 231 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 MIR3200-201ENST00000580767 85 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 AC024153.1-201ENST00000603103 365 ntBASIC3.67□□□□□ -1.82
EPHB3P54753 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.67□□□□□ -1.82
EPHB3P54753 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms