Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC243964.1-201ENST00000441814 261 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 MTND2P33-201ENST00000506452 1031 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN4AP35499 SMURF2P1-201ENST00000514992 481 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN4AP35499 AC092325.1-201ENST00000566449 554 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC006362.1-201ENST00000567392 174 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN4AP35499 RNU6-169P-201ENST00000365336 107 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC068050.1-201ENST00000394891 380 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 MED13P1-201ENST00000428342 171 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN4AP35499 AL596276.1-201ENST00000434465 418 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 USP9YP29-201ENST00000445112 563 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN4AP35499 AC079140.5-201ENST00000507882 310 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC010486.3-201ENST00000511602 785 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN4AP35499 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN4AP35499 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN4AP35499 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN4AP35499 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN4AP35499 MTCYBP33-201ENST00000575007 1130 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN4AP35499 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN4AP35499 AC009509.4-201ENST00000619202 509 ntBASIC1.45□□□□□ -2.18
SCN4AP35499 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SCN4AP35499 MTND5P10-201ENST00000603719 1809 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SCN4AP35499 Y_RNA.22-201ENST00000362492 102 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 SNORD3E-201ENST00000362899 217 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 RNU6-72P-201ENST00000384285 79 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 RNU6-434P-201ENST00000384376 107 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 RNU6-1106P-201ENST00000390845 107 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN4AP35499 AC016831.2-201ENST00000417179 352 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN4AP35499 MTCO2P11-201ENST00000431069 680 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN4AP35499 MTCYBP40-201ENST00000509390 1135 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.44□□□□□ -2.18
SCN4AP35499 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN4AP35499 OR5AL2P-201ENST00000532185 920 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AL356057.1-201ENST00000533798 831 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AC012414.6-201ENST00000568241 401 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 MIR4529-201ENST00000578110 78 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AC091152.3-201ENST00000604227 325 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AC087752.4-201ENST00000605911 462 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 AC009233.1-201ENST00000616477 371 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 U6.114-201ENST00000636407 96 ntBASIC1.44□□□□□ -2.18
SCN4AP35499 HAUS6P2-201ENST00000433254 2404 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 Y_RNA.33-201ENST00000362591 102 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 RNU4-48P-201ENST00000365559 182 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 Y_RNA.393-201ENST00000383936 102 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AL031779.1-201ENST00000415663 330 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 CETN4P-201ENST00000432407 469 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.43□□□□□ -2.18
SCN4AP35499 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.43□□□□□ -2.18
SCN4AP35499 AC092001.1-201ENST00000453012 261 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 RNU6-333P-201ENST00000459117 107 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC018437.1-201ENST00000492214 406 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC116562.3-201ENST00000506136 177 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 RBBP4P6-201ENST00000508098 202 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC068587.5-201ENST00000528506 175 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN4AP35499 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.43□□□□□ -2.18
SCN4AP35499 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN4AP35499 CLIC4P2-201ENST00000601934 717 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AL161423.1-201ENST00000613700 262 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC099842.1-201ENST00000619919 596 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC024581.2-201ENST00000619986 252 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC138627.2-201ENST00000624202 601 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 SCARNA4-202ENST00000625402 129 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC090582.1-201ENST00000636321 199 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.43□□□□□ -2.18
SCN4AP35499 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SCN4AP35499 RNU6-527P-201ENST00000363425 104 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 Y_RNA.296-201ENST00000364930 108 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SCN4AP35499 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 MTND4P32-201ENST00000437189 1237 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 RPL30P1-201ENST00000488676 339 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.43□□□□□ -2.18
SCN4AP35499 AL133241.1-201ENST00000556832 487 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.43□□□□□ -2.18
SCN4AP35499 RSL24D1P11-201ENST00000591045 491 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC087683.1-201ENST00000591187 441 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC010620.1-201ENST00000601088 1102 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AL590229.1-201ENST00000603497 542 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC012507.3-201ENST00000603556 477 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AL355598.1-201ENST00000604169 202 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AL158032.1-201ENST00000605401 106 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC092354.1-201ENST00000606057 376 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC135507.1-201ENST00000607214 561 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 AC104073.3-201ENST00000610942 955 ntBASIC1.43□□□□□ -2.18
SCN4AP35499 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
SCN4AP35499 RNU6-179P-201ENST00000363350 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms