Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR5701-1-201ENST00000585138 82 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 MIR5701-2-201ENST00000615634 82 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 AC137590.2-201ENST00000619709 240 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNHG28P0DPA3 MTND5P6-201ENST00000422338 1798 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNHG28P0DPA3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNHG28P0DPA3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNHG28P0DPA3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SNHG28P0DPA3 RNU6-384P-201ENST00000364900 104 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.324-201ENST00000365165 102 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 RNU6-76P-201ENST00000384060 104 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.551-201ENST00000384661 102 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 RNU6-817P-201ENST00000391083 104 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 AL353621.1-201ENST00000418219 243 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 AL592045.1-201ENST00000429867 352 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.95□□□□□ -1.94
SNHG28P0DPA3 KC877373.1-201ENST00000479066 408 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 SRIP1-201ENST00000489235 288 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 AC093852.1-201ENST00000503587 266 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 RNU6-406P-201ENST00000516470 107 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.687-201ENST00000516558 91 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 AP003385.6-201ENST00000531603 374 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.95□□□□□ -1.94
SNHG28P0DPA3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.95□□□□□ -1.94
SNHG28P0DPA3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.95□□□□□ -1.94
SNHG28P0DPA3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 AP001282.2-201ENST00000616149 309 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 AL512643.1-201ENST00000635735 524 ntBASIC2.95□□□□□ -1.94
SNHG28P0DPA3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.152-201ENST00000363578 100 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 U8.8-201ENST00000365399 135 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 Y_RNA.480-201ENST00000384364 102 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 RNU6-713P-201ENST00000384761 107 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 RNU6-882P-201ENST00000391025 103 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AP000275.1-201ENST00000411943 390 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AC139712.2-201ENST00000424302 339 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 MTND5P15-201ENST00000434246 349 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AC092573.2-201ENST00000434546 243 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AL121871.1-201ENST00000443413 436 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 MTCO3P8-201ENST00000453691 755 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 OR1M4P-201ENST00000589199 287 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AL159153.1-201ENST00000619688 317 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 U4.3-201ENST00000621047 82 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AL360181.4-201ENST00000621752 134 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 Z99571.1-201ENST00000636677 394 ntBASIC2.94□□□□□ -1.94
SNHG28P0DPA3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SNHG28P0DPA3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 RNU6-512P-201ENST00000364438 103 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 SNORA20.1-201ENST00000364790 130 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 RNU6-338P-201ENST00000383888 105 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 SNORA51.11-201ENST00000384442 131 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 RNU6-790P-201ENST00000384479 105 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 SAR1AP2-201ENST00000392696 594 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AL137014.1-201ENST00000420490 1226 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 MTATP6P4-201ENST00000427725 675 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 HMGB1P35-201ENST00000503360 598 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 RNU6-307P-201ENST00000516743 106 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AP003733.2-201ENST00000529409 171 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AL355812.1-201ENST00000603215 216 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 AC073410.2-201ENST00000603240 332 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 MIR4496-201ENST00000635896 61 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 FAM35CP-201ENST00000554755 2470 ntBASIC2.93□□□□□ -1.94
SNHG28P0DPA3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 AC009812.4-201ENST00000569134 1805 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 snoU2_19.2-201ENST00000363024 80 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 RNA5SP456-201ENST00000364002 114 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 RNU6-629P-201ENST00000384061 103 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 RNU6-1179P-201ENST00000384667 107 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 EIF4EP2-201ENST00000422816 654 ntBASIC2.92□□□□□ -1.94
SNHG28P0DPA3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.92□□□□□ -1.94
SNHG28P0DPA3 RPEP5-201ENST00000441137 268 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms