Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 Y_RNA.338-201ENST00000365320 114 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-969P-201ENST00000383900 105 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AF228730.1-201ENST00000397972 663 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 MIR1284-201ENST00000408337 120 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 MIR320C1-201ENST00000408566 88 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AC245047.7-201ENST00000440265 293 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 SUMO2P16-201ENST00000519475 264 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 OR8K2P-201ENST00000524645 927 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 MIR3146-201ENST00000580367 79 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 FAM106DP-201ENST00000586416 501 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 VN1R82P-201ENST00000601481 356 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 OR4G1P-203ENST00000641984 1631 ntBASIC0.3□□□□□ -2.36
TRAV13-1A0A0B4J241 ELL2P3-201ENST00000457883 1602 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 RNY1P10-201ENST00000363268 113 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 Y_RNA.363-201ENST00000365529 113 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-945P-201ENST00000383947 107 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC011233.1-201ENST00000422812 283 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AL353718.1-201ENST00000451028 517 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 MTCYBP1-201ENST00000454315 1119 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-751P-201ENST00000516382 101 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC022784.5-201ENST00000522241 437 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC092451.2-201ENST00000538746 658 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 MIR4714-201ENST00000580728 77 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 MIR3136-201ENST00000583498 78 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC092104.1-201ENST00000497346 1441 ntBASIC0.29□□□□□ -2.36
TRAV13-1A0A0B4J241 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 RNA5SP347-201ENST00000362445 119 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU1-93P-201ENST00000364704 169 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-534P-201ENST00000364877 106 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 RN7SKP266-201ENST00000410232 287 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 AC244023.1-201ENST00000426884 112 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 AC010531.2-201ENST00000465012 153 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 MTCO3P9-201ENST00000506989 781 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 MTND3P5-201ENST00000512798 333 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-1053P-201ENST00000515930 101 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-1041P-201ENST00000516254 102 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 MIR4742-201ENST00000581069 85 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 AC242498.1-201ENST00000604134 111 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 AC008147.4-201ENST00000617570 1204 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 AC243994.1-201ENST00000618627 109 ntBASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
TRAV13-1A0A0B4J241 RNU6-1285P-201ENST00000363480 105 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORA80D-201ENST00000384488 135 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 RPL23AP95-201ENST00000426806 265 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 ISCA1P6-201ENST00000427740 390 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AL035398.1-201ENST00000430869 322 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AC016925.1-201ENST00000458303 298 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AC022447.4-201ENST00000504053 364 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 APOOP3-201ENST00000536787 586 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 HMGN1P30-201ENST00000589286 268 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AC092574.1-201ENST00000609771 420 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AL353149.1-201ENST00000610667 244 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AC104073.3-201ENST00000610942 955 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 AC021506.2-201ENST00000612354 169 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 U6.42-201ENST00000618440 107 ntBASIC0.27□□□□□ -2.37
TRAV13-1A0A0B4J241 MIR337-201ENST00000362281 93 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 RNA5SP499-201ENST00000363982 119 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-384P-201ENST00000364900 104 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORD31B-201ENST00000364977 69 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORA50A-201ENST00000384225 134 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 MIR544A-201ENST00000384855 91 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 VPS26BP1-201ENST00000417155 755 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 MTCYBP39-201ENST00000437562 491 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms