Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.28□□□□□ -1.88
PNKPQ96T60 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.28□□□□□ -1.88
PNKPQ96T60 AC010655.3-201ENST00000478818 450 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 RPL22P13-201ENST00000493291 347 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.28□□□□□ -1.88
PNKPQ96T60 RNU7-4P-201ENST00000516961 62 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 AC022616.4-201ENST00000522985 181 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 AC022080.3-201ENST00000544433 482 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 EIF4BP1-201ENST00000554881 351 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.28□□□□□ -1.88
PNKPQ96T60 AC006600.1-201ENST00000572529 153 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 HSPE1P7-201ENST00000604681 321 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 MIR6134-201ENST00000617606 109 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 AC241585.2-209ENST00000638217 143 ntBASIC3.28□□□□□ -1.88
PNKPQ96T60 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PNKPQ96T60 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.89
PNKPQ96T60 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PNKPQ96T60 RNU6-874P-201ENST00000362390 105 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 RNU1-100P-201ENST00000365255 165 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 RNU6-784P-201ENST00000384330 106 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 Y_RNA.512-201ENST00000384518 102 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 Y_RNA.574-201ENST00000384766 95 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 RNU6-700P-201ENST00000391043 107 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 RPS4XP3-201ENST00000398541 413 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 AL590004.2-201ENST00000404787 371 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 SNORA11.2-201ENST00000408318 127 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 NDUFS5P4-201ENST00000412983 318 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 AC007098.1-201ENST00000420122 367 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 MTCO3P29-201ENST00000432119 779 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 RPL21P2-201ENST00000440049 481 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.27□□□□□ -1.89
PNKPQ96T60 RPL26P9-201ENST00000457466 433 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 RN7SL20P-201ENST00000488827 297 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 MRPS35P2-201ENST00000508242 191 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 SNORA40.14-201ENST00000516543 86 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.27□□□□□ -1.89
PNKPQ96T60 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 uc_338.25-201ENST00000613756 156 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 AC006386.2-201ENST00000624491 75 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 AC012005.1-201ENST00000624575 75 ntBASIC3.27□□□□□ -1.89
PNKPQ96T60 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PNKPQ96T60 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PNKPQ96T60 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.26□□□□□ -1.89
PNKPQ96T60 SNORD116-20-201ENST00000384529 92 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 BTF3L4P2-201ENST00000392798 346 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 FTH1P15-201ENST00000406984 280 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.26□□□□□ -1.89
PNKPQ96T60 AL591043.1-201ENST00000432461 424 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PNKPQ96T60 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.26□□□□□ -1.89
PNKPQ96T60 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.26□□□□□ -1.89
PNKPQ96T60 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.26□□□□□ -1.89
PNKPQ96T60 RNU6-581P-201ENST00000516214 105 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AC144568.1-201ENST00000520139 137 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AC131281.1-201ENST00000522984 164 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AC040926.1-201ENST00000530195 238 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AL590705.4-201ENST00000532209 134 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AL391261.3-201ENST00000557194 520 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.26□□□□□ -1.89
PNKPQ96T60 UBL5P2-201ENST00000583788 219 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 VN1R107P-201ENST00000601784 209 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AC006006.1-201ENST00000603082 144 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AC016727.2-201ENST00000603988 621 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 PRR13P7-201ENST00000605538 430 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 AC073308.1-201ENST00000623696 305 ntBASIC3.26□□□□□ -1.89
PNKPQ96T60 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PNKPQ96T60 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PNKPQ96T60 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.26□□□□□ -1.89
PNKPQ96T60 AL365361.1-201ENST00000566942 3481 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.25□□□□□ -1.89
PNKPQ96T60 RNU6-1109P-201ENST00000391187 107 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 MIR1302-3-201ENST00000408128 138 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 AP000275.1-201ENST00000411943 390 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.25□□□□□ -1.89
PNKPQ96T60 AC243964.1-201ENST00000441814 261 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.25□□□□□ -1.89
PNKPQ96T60 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.25□□□□□ -1.89
PNKPQ96T60 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.25□□□□□ -1.89
PNKPQ96T60 AC006026.2-201ENST00000457376 180 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 snoU13.28-201ENST00000459235 104 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 AC008885.1-201ENST00000514930 301 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 MRPS36P4-201ENST00000534436 298 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.25□□□□□ -1.89
PNKPQ96T60 MIR3609-201ENST00000582661 80 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 VN1R91P-201ENST00000594377 169 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 Z98751.3-201ENST00000604447 521 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 AC093732.2-201ENST00000607950 274 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 AL138825.1-201ENST00000618587 192 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 U4.1-201ENST00000620349 87 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.25□□□□□ -1.89
PNKPQ96T60 AC009541.1-201ENST00000438279 2662 ntBASIC3.25□□□□□ -1.89
PNKPQ96T60 SNORD56.1-201ENST00000362913 68 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 Y_RNA.210-201ENST00000364161 110 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 Y_RNA.380-201ENST00000365663 111 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 SNORA44-201ENST00000384584 132 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 SNORA69.1-201ENST00000390904 137 ntBASIC3.24□□□□□ -1.89
PNKPQ96T60 MIR1252-201ENST00000408861 65 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms