Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 SNORD87-201ENST00000364849 89 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 RNU6-748P-201ENST00000384648 107 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 MIR513C-201ENST00000401352 84 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 PTGES3P4-201ENST00000426243 356 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 RNA5SP310-201ENST00000459084 116 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 SNORD19.2-201ENST00000516978 73 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 CYCSP29-201ENST00000533731 318 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AC109810.1-201ENST00000534066 224 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AC027176.1-201ENST00000560204 514 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 MIR4429-201ENST00000580105 73 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AC091152.3-201ENST00000604227 325 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AC091905.2-201ENST00000623143 306 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AC018692.3-201ENST00000623929 123 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 MIR3658-201ENST00000636291 56 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AC134026.1-201ENST00000623249 2239 ntBASIC4.52□□□□□ -1.69
PCDHB9Q9Y5E1 AF127577.6-201ENST00000623352 2191 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 RNU4-10P-201ENST00000364383 140 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.243-201ENST00000364481 109 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 RNU1-63P-201ENST00000383902 164 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 RNA5SP504-201ENST00000410676 117 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 PHBP16-201ENST00000446318 950 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 AL645939.1-201ENST00000453429 797 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 snoU13.14-201ENST00000459372 104 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 RNU6-1333P-201ENST00000516162 93 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 EIF4A1P12-201ENST00000551910 141 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 RPS15AP11-201ENST00000594193 385 ntBASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHB9Q9Y5E1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 NEAT1-202ENST00000501122 22743 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.40-201ENST00000362645 93 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 RNU6-1010P-201ENST00000362757 107 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.71-201ENST00000362892 104 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 RNU6-529P-201ENST00000363383 104 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.293-201ENST00000364908 93 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 SNORA62.3-201ENST00000365110 153 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.368-201ENST00000365547 113 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 RNA5SP151-201ENST00000365632 117 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 SNORD116-14-201ENST00000383894 92 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 SNORD116-17-201ENST00000383929 92 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 SNORD116-15-201ENST00000384445 92 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 SNORD116-19-201ENST00000384729 92 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 SNORD96B-201ENST00000386148 79 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 AC023141.4-201ENST00000412031 328 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 TOMM22P2-201ENST00000430735 237 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 AC004386.2-201ENST00000441858 148 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 RNA5SP497-201ENST00000516081 97 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 AC023632.4-201ENST00000517783 191 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 RN7SL176P-201ENST00000580352 264 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 AL359881.1-201ENST00000602916 267 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 Y_RNA.802-201ENST00000614892 130 ntBASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHB9Q9Y5E1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 AL353746.1-201ENST00000566293 6881 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 AL672296.1-201ENST00000427780 2158 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 RNU1-75P-201ENST00000347264 129 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 RNU6-19P-201ENST00000384718 107 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 MIR616-201ENST00000385293 97 ntBASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHB9Q9Y5E1 RN7SKP202-201ENST00000410439 330 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms