Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AC131280.1-202ENST00000624067 4211 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 MTND5P6-201ENST00000422338 1798 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-212P-201ENST00000362642 104 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 RNA5SP219-201ENST00000390940 113 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AC008267.5-201ENST00000424928 265 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AL356320.1-201ENST00000429616 163 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AL031274.1-201ENST00000450334 232 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 RNU7-167P-201ENST00000459160 62 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 CCDC34P1-201ENST00000507441 517 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 RNU2-53P-201ENST00000516257 147 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-314P-201ENST00000516574 104 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 Y_RNA.704-201ENST00000516851 102 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AL512360.1-201ENST00000555346 234 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 RPL30P11-203ENST00000598995 310 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 AC007792.1-201ENST00000623023 402 ntBASIC2.11□□□□□ -2.07
ATG4BQ9Y4P1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 RNU1-91P-201ENST00000364746 163 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 RNU4-66P-201ENST00000365199 138 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 Y_RNA.481-201ENST00000384373 102 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 OOSP1P1-201ENST00000423265 274 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC009238.1-201ENST00000442165 424 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC009237.6-201ENST00000446969 424 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-261P-201ENST00000459506 102 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC068781.1-201ENST00000488231 618 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 HMGB3P3-201ENST00000510526 400 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-377P-201ENST00000515965 102 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 SNORA25.17-201ENST00000517184 124 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC022880.1-201ENST00000534017 973 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC023050.3-201ENST00000541142 333 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 MTCO3P23-201ENST00000561363 289 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 U4.7-201ENST00000638126 106 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 AC099654.12-201ENST00000639868 649 ntBASIC2.1□□□□□ -2.07
ATG4BQ9Y4P1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-428P-201ENST00000362942 107 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 CBX3P9-201ENST00000402326 552 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 SNORD56-201ENST00000413522 71 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 TPTE2P5-203ENST00000458118 728 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 MTCO3P38-201ENST00000468910 766 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 RNU1-41P-201ENST00000516161 162 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 RNU1-48P-201ENST00000516400 162 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-506P-201ENST00000516553 94 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 Y_RNA.693-201ENST00000516641 110 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AC107304.1-201ENST00000604229 296 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 APOOP1-201ENST00000604695 592 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AC092954.2-201ENST00000609103 430 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AL161423.1-201ENST00000613700 262 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AL159153.1-201ENST00000619688 317 ntBASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.09□□□□□ -2.07
ATG4BQ9Y4P1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.09□□□□□ -2.08
ATG4BQ9Y4P1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 RNU6-655P-201ENST00000362858 107 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 U8.2-201ENST00000363156 134 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 U3.13-201ENST00000364804 214 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 RN7SKP223-201ENST00000410582 62 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AL139415.2-201ENST00000431968 163 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AL031659.1-201ENST00000447075 539 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 SNRPGP7-201ENST00000469016 106 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC087884.1-201ENST00000469738 328 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AL121594.1-201ENST00000475906 575 ntBASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.08□□□□□ -2.08
ATG4BQ9Y4P1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms