Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
RAB6CQ53S08 MIR3672-201ENST00000584290 82 ntBASIC2.55□□□□□ -2
RAB6CQ53S08 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.55□□□□□ -2
RAB6CQ53S08 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.55□□□□□ -2
RAB6CQ53S08 AC009314.1-201ENST00000603871 304 ntBASIC2.55□□□□□ -2
RAB6CQ53S08 AC021646.1-201ENST00000605469 484 ntBASIC2.55□□□□□ -2
RAB6CQ53S08 AL355073.2-201ENST00000612106 557 ntBASIC2.55□□□□□ -2
RAB6CQ53S08 MIR6852-201ENST00000621699 66 ntBASIC2.55□□□□□ -2
RAB6CQ53S08 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
RAB6CQ53S08 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
RAB6CQ53S08 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
RAB6CQ53S08 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAB6CQ53S08 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAB6CQ53S08 RNA5SP289-201ENST00000362332 137 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 RNU6-428P-201ENST00000362942 107 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 RNU6-105P-201ENST00000363909 104 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RAB6CQ53S08 RNU6-843P-201ENST00000384454 104 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 MIR1289-1-201ENST00000408836 144 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC074117.2-201ENST00000417130 397 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.54□□□□□ -2
RAB6CQ53S08 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.54□□□□□ -2
RAB6CQ53S08 AC107399.1-201ENST00000451226 265 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC018437.1-201ENST00000492214 406 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC114801.2-201ENST00000503825 781 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.54□□□□□ -2
RAB6CQ53S08 AC092436.3-201ENST00000511788 257 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 SCOCP1-201ENST00000554676 349 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.54□□□□□ -2
RAB6CQ53S08 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.54□□□□□ -2
RAB6CQ53S08 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 RNU6-91P-201ENST00000607774 107 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC046143.2-201ENST00000609789 160 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC025253.1-201ENST00000613623 543 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 Y_RNA.804-201ENST00000615262 101 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 AC005858.4-201ENST00000623191 700 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RAB6CQ53S08 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
RAB6CQ53S08 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.54□□□□□ -2
RAB6CQ53S08 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
RAB6CQ53S08 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2
RAB6CQ53S08 RNU1-51P-201ENST00000365345 176 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 RNU6-790P-201ENST00000384479 105 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 AMD1P1-201ENST00000457220 922 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 AP001324.2-201ENST00000461163 319 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.53□□□□□ -2
RAB6CQ53S08 AC103851.1-201ENST00000506833 274 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 RNU5B-3P-201ENST00000516601 115 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 RNU1-54P-201ENST00000517181 120 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 RNA5SP454-201ENST00000517231 127 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.53□□□□□ -2
RAB6CQ53S08 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.53□□□□□ -2
RAB6CQ53S08 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
RAB6CQ53S08 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.53□□□□□ -2
RAB6CQ53S08 BNIP3P16-201ENST00000589779 534 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 VN1R107P-201ENST00000601784 209 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 AC064836.2-201ENST00000609491 462 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 AC104237.2-201ENST00000612456 443 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 AC097372.5-201ENST00000623665 376 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 TPTEP1-208ENST00000636884 213 ntBASIC2.53□□□□□ -2
RAB6CQ53S08 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
RAB6CQ53S08 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.53□□□□□ -2
RAB6CQ53S08 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.53□□□□□ -2
RAB6CQ53S08 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
RAB6CQ53S08 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 Y_RNA.142-201ENST00000363491 102 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 RNU6-336P-201ENST00000364891 107 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 RNU6-867P-201ENST00000364956 107 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 SNORD81.2-201ENST00000365153 76 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 RNU6-487P-201ENST00000365430 104 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC074085.1-201ENST00000413598 418 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 AL645568.3-201ENST00000433683 316 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 FABP5P14-201ENST00000437273 393 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 HMGB1P18-201ENST00000438801 619 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC013470.1-201ENST00000453438 462 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AP000705.1-201ENST00000454567 350 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 RPL36AP48-201ENST00000485521 314 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC026436.1-201ENST00000510537 270 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 RNU6-1088P-201ENST00000516850 104 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 SCARNA11.3-201ENST00000517276 130 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 MIR4765-201ENST00000585007 77 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAB6CQ53S08 AC104260.1-201ENST00000616660 539 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 AL359854.1-201ENST00000614203 1594 ntBASIC2.52□□□□□ -2.01
RAB6CQ53S08 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RAB6CQ53S08 SNORD114-19-201ENST00000363072 75 ntBASIC2.51□□□□□ -2.01
RAB6CQ53S08 Y_RNA.135-201ENST00000363439 95 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms