Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AC090774.1-201ENST00000435925 246 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL360271.2-201ENST00000447710 161 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 SNORD127-201ENST00000458892 86 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 ERHP1-201ENST00000523006 310 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AC104576.1-201ENST00000524225 88 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AC007375.1-201ENST00000554513 578 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 MIR5188-201ENST00000583467 113 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL670379.6-201ENST00000603753 252 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL355297.3-201ENST00000604082 446 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL670379.1-201ENST00000604752 252 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL670379.5-201ENST00000605253 252 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL670379.8-201ENST00000605353 252 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL670379.7-201ENST00000605823 252 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 MIR4272-201ENST00000635924 64 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL079305.1-201ENST00000623159 3008 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 Y_RNA.60-201ENST00000362831 98 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 MIR578-201ENST00000384828 96 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 RNU2-38P-201ENST00000410856 79 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 RNU4-78P-201ENST00000410940 126 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 NEFMP1-201ENST00000443423 1006 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AP002884.2-201ENST00000471647 395 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AC103975.1-201ENST00000482506 483 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AC026801.1-201ENST00000497178 464 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AL136360.1-201ENST00000503377 1900 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 MTND3P25-201ENST00000509243 135 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AC096725.1-201ENST00000514266 313 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 SNORA31.3-201ENST00000516029 96 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 SNORA31.22-201ENST00000517204 135 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 CYCSP27-201ENST00000527643 293 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 OR4H12P-201ENST00000556269 907 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 SUB1P3-201ENST00000564581 315 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AC010615.1-201ENST00000594254 1764 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.06□□□□□ -1.92
SNHG28P0DPA3 AC010733.2-201ENST00000589496 5702 ntBASIC3.06□□□□□ -1.92
SNHG28P0DPA3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 MIR517A-201ENST00000385001 87 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 MT-TC-201ENST00000387405 66 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RNU6-821P-201ENST00000390995 107 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 MIR1252-201ENST00000408861 65 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 CYCSP33-201ENST00000414485 327 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AL353997.1-201ENST00000432936 108 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 OSTCP8-201ENST00000445117 448 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RNU6-1132P-201ENST00000459214 107 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AC108860.1-201ENST00000484521 383 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RNU6-475P-201ENST00000516073 104 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RNU2-53P-201ENST00000516257 147 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RNY3P15-201ENST00000516297 97 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 Y_RNA.715-201ENST00000517082 110 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 MIR4635-201ENST00000583759 79 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AL031176.1-201ENST00000604554 466 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 RAC1P9-201ENST00000604990 392 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 MIR15A-201ENST00000607334 83 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AC100812.1-201ENST00000607622 580 ntBASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNHG28P0DPA3 AC007336.1-201ENST00000576365 3828 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms