Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.12□□□□□ -2.07
HDAC3O15379 AC236972.1-201ENST00000433225 199 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AL121601.2-201ENST00000438019 707 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 MTCO3P18-201ENST00000440206 761 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 SNRPFP3-201ENST00000457792 225 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 HMGN2P26-201ENST00000463169 339 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.12□□□□□ -2.07
HDAC3O15379 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.12□□□□□ -2.07
HDAC3O15379 RPL38P4-201ENST00000502376 214 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.12□□□□□ -2.07
HDAC3O15379 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 SNORD60.2-201ENST00000516883 86 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.12□□□□□ -2.07
HDAC3O15379 AC025755.1-201ENST00000521306 278 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AL137161.1-201ENST00000532231 390 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AC023050.3-201ENST00000541142 333 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 BNIP3P6-201ENST00000549284 499 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AL391261.3-201ENST00000557194 520 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 LRRC37A5P-203ENST00000580181 585 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AC005730.3-201ENST00000583067 366 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AL138889.2-201ENST00000603883 242 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 RNU6-89P-201ENST00000606519 100 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 uc_338.34-201ENST00000617467 174 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 AL162373.1-201ENST00000620433 407 ntBASIC2.12□□□□□ -2.07
HDAC3O15379 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.12□□□□□ -2.07
HDAC3O15379 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.12□□□□□ -2.07
HDAC3O15379 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.12□□□□□ -2.07
HDAC3O15379 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HDAC3O15379 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HDAC3O15379 MTND4P14-201ENST00000435799 1354 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HDAC3O15379 RNU6-778P-201ENST00000363269 103 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU6-884P-201ENST00000363889 107 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU6-371P-201ENST00000364283 108 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 Y_RNA.231-201ENST00000364358 102 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 Y_RNA.279-201ENST00000364763 95 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU4-66P-201ENST00000365199 138 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 Y_RNA.378-201ENST00000365652 113 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 MIR221-201ENST00000385135 110 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HDAC3O15379 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HDAC3O15379 AL078595.1-201ENST00000404458 226 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU6-1025P-201ENST00000410629 104 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU2-68P-201ENST00000410878 191 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.11□□□□□ -2.07
HDAC3O15379 CALM1P1-201ENST00000442082 433 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.11□□□□□ -2.07
HDAC3O15379 AL021397.1-201ENST00000451806 248 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 SCARNA18-201ENST00000459004 134 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RPL37P6-201ENST00000460682 294 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 HMGN1P12-201ENST00000499125 195 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 AC091951.2-201ENST00000500762 203 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 AC008628.2-201ENST00000502605 298 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 AC025465.4-201ENST00000513422 638 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU2-69P-201ENST00000516061 100 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU1-86P-201ENST00000516108 154 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 Y_RNA.665-201ENST00000516177 98 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU1-107P-201ENST00000516617 154 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.11□□□□□ -2.07
HDAC3O15379 CENPUP1-201ENST00000526649 1202 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.11□□□□□ -2.07
HDAC3O15379 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.11□□□□□ -2.07
HDAC3O15379 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.11□□□□□ -2.07
HDAC3O15379 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.11□□□□□ -2.07
HDAC3O15379 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.11□□□□□ -2.07
HDAC3O15379 MIR548AC-201ENST00000585049 88 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 MTND4LP5-201ENST00000605152 292 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 BNIP3P10-201ENST00000605360 577 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 AC009994.1-201ENST00000606889 253 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 AL136221.1-201ENST00000621449 509 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
HDAC3O15379 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.11□□□□□ -2.07
HDAC3O15379 Y_RNA.33-201ENST00000362591 102 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 Z98749.2-208ENST00000381646 500 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 SNORD70.1-201ENST00000391007 85 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 RPL21P90-201ENST00000415692 466 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 RPL21P111-201ENST00000418453 477 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.1□□□□□ -2.07
HDAC3O15379 USP9YP8-201ENST00000441913 500 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.1□□□□□ -2.07
HDAC3O15379 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.1□□□□□ -2.07
HDAC3O15379 AL583843.1-201ENST00000456070 346 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC087884.1-201ENST00000469738 328 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 RPL21P99-201ENST00000480369 423 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 RPS27AP10-201ENST00000496103 208 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC114786.4-201ENST00000508771 728 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 MTND3P25-201ENST00000509243 135 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 SNORA31.19-201ENST00000517079 126 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.1□□□□□ -2.07
HDAC3O15379 AC107953.1-201ENST00000522216 297 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.1□□□□□ -2.07
HDAC3O15379 AC027176.1-201ENST00000560204 514 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HDAC3O15379 MIR1273C-201ENST00000578669 77 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 HMGN2P15-201ENST00000585707 270 ntBASIC2.1□□□□□ -2.07
HDAC3O15379 AC018638.8-201ENST00000588755 281 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms