Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 Y_RNA.210-201ENST00000364161 110 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.214-201ENST00000364201 112 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 RNU6-371P-201ENST00000364283 108 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.428-201ENST00000384078 102 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 SSXP9-201ENST00000417503 292 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 ELOCP20-201ENST00000422460 345 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 USMG5P1-201ENST00000425964 177 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 RPL35AP22-201ENST00000436855 335 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AL590399.6-201ENST00000446396 307 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 RPS27AP1-201ENST00000475545 471 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 HMGB3P17-201ENST00000504195 649 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 RNU1-54P-201ENST00000517181 120 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AC131281.1-201ENST00000522984 164 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AC026371.1-201ENST00000551867 419 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AL138889.2-201ENST00000603883 242 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AL021879.1-201ENST00000611756 288 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AL606534.2-204ENST00000635008 178 ntBASIC3.1□□□□□ -1.91
SNHG28P0DPA3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SNHG28P0DPA3 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC233263.6-201ENST00000631132 1963 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 RNU6-128P-201ENST00000383976 107 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 RNU6-434P-201ENST00000384376 107 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 SNORD73A-201ENST00000386062 65 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AP000567.1-201ENST00000406413 156 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 RNU2-64P-201ENST00000411315 191 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 RNA5SP111-201ENST00000411386 101 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 YPEL5P1-201ENST00000419731 367 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AL359672.1-201ENST00000442302 409 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC078918.1-201ENST00000498515 228 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC010265.1-201ENST00000513509 211 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 SNORA31.21-201ENST00000517180 77 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AC125232.2-201ENST00000592457 143 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AL359547.2-201ENST00000615810 418 ntBASIC3.09□□□□□ -1.91
SNHG28P0DPA3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.09□□□□□ -1.91
SNHG28P0DPA3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 RNU6-874P-201ENST00000362390 105 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 RNU6-288P-201ENST00000363690 104 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 RNA5SP56-201ENST00000410277 118 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 RNU4-65P-201ENST00000410473 140 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC011816.1-201ENST00000441346 546 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 snoU109.4-201ENST00000458953 143 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC114801.2-201ENST00000503825 781 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC096745.1-201ENST00000509945 370 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 GNAI2P1-201ENST00000541815 315 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AC005951.2-201ENST00000576282 495 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 MIR3128-201ENST00000581957 66 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 AL450472.3-201ENST00000615578 367 ntBASIC3.08□□□□□ -1.92
SNHG28P0DPA3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.08□□□□□ -1.92
SNHG28P0DPA3 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 RNU6-45P-201ENST00000384471 107 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 SNORA41-201ENST00000384675 132 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 Y_RNA.556-201ENST00000384677 113 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 MIR153-1-201ENST00000384914 90 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AC099677.1-201ENST00000420575 175 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 AL160275.3-201ENST00000423876 471 ntBASIC3.07□□□□□ -1.92
SNHG28P0DPA3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms