Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC107401.1-201ENST00000503426 685 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AP002770.2-201ENST00000543613 532 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 HIF1AP1-201ENST00000553642 175 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC091544.4-201ENST00000555268 342 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 MIR5583-1-201ENST00000580941 59 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC103987.3-201ENST00000582071 292 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 AC005609.4-201ENST00000625071 447 ntBASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
ATG4BQ9Y4P1 RNU1-72P-201ENST00000362976 153 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 Y_RNA.318-201ENST00000365131 97 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 Y_RNA.517-201ENST00000384551 106 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 SNORD37.1-201ENST00000390968 65 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 RNA5SP390-201ENST00000410191 113 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 CYCSP33-201ENST00000414485 327 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AL365400.1-201ENST00000431854 640 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 RPL32P28-201ENST00000443577 397 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 RN7SL429P-201ENST00000479090 223 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 RN7SL489P-201ENST00000486185 223 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 RN7SL327P-201ENST00000488659 223 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 MTND2P33-201ENST00000506452 1031 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 MIR5007-201ENST00000583098 95 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 MIR4298-201ENST00000584380 73 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AL138963.2-201ENST00000605137 226 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AL121917.1-203ENST00000605534 577 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AC093788.1-201ENST00000609356 927 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AC013412.1-201ENST00000610687 192 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AC009233.1-201ENST00000616477 371 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 RN7SL853P-201ENST00000617250 223 ntBASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ATG4BQ9Y4P1 AL354685.2-201ENST00000448218 1447 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-622P-201ENST00000384272 103 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-434P-201ENST00000384376 107 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 MIR524-201ENST00000385242 87 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 SNORA16.2-201ENST00000390991 127 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 USP9YP27-201ENST00000418455 438 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC018634.1-201ENST00000437554 401 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 MTCO2P7-201ENST00000446518 666 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC073415.1-201ENST00000449240 153 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AL139109.1-201ENST00000455491 297 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC140059.1-201ENST00000489238 361 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 RPL9P6-201ENST00000492764 598 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 LRRC34P2-201ENST00000514850 553 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 RNU2-69P-201ENST00000516061 100 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 SNORA43.2-201ENST00000516652 128 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 IGLV3-17-201ENST00000519099 244 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC245505.1-201ENST00000556398 224 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC105137.2-201ENST00000569073 466 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC021646.1-201ENST00000605469 484 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AP001596.2-201ENST00000608410 312 ntBASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ATG4BQ9Y4P1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 RNU6-529P-201ENST00000363383 104 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 RNU1-57P-201ENST00000384491 166 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 RPL7P54-201ENST00000438336 674 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AL161788.1-201ENST00000441805 169 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC124916.1-201ENST00000444020 547 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC011753.1-201ENST00000451001 220 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AL163973.1-201ENST00000484753 577 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC079140.5-201ENST00000507882 310 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 SNORA48.11-201ENST00000517015 89 ntBASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.17□□□□□ -2.06
ATG4BQ9Y4P1 AL137161.1-201ENST00000532231 390 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms