Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC39Q96DD0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LRRC39Q96DD0 RNU6-991P-201ENST00000516168 107 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 SNORA31.17-201ENST00000516953 127 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AC002400.1-201ENST00000569310 726 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AL353997.5-201ENST00000618886 171 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AC091304.6-201ENST00000619761 202 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AC130454.1-201ENST00000622948 401 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AC008993.2-201ENST00000631744 806 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 AC106858.1-201ENST00000637497 429 ntBASIC1.41□□□□□ -2.18
LRRC39Q96DD0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
LRRC39Q96DD0 snoU2_19.1-201ENST00000362361 80 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 RNY3P13-201ENST00000365542 102 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 RNU6-946P-201ENST00000383878 107 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 RNU6-1000P-201ENST00000391066 106 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC092809.3-201ENST00000415453 231 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 MTCO1P44-201ENST00000441935 243 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 RNU6-333P-201ENST00000459117 107 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC010409.1-201ENST00000487382 476 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AP003034.1-201ENST00000534621 422 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC078795.2-201ENST00000602835 1252 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC112187.2-201ENST00000604345 283 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC024940.5-201ENST00000622889 474 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 MIR1248-201ENST00000629190 106 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.4□□□□□ -2.19
LRRC39Q96DD0 AC013437.2-201ENST00000639587 677 ntBASIC1.4□□□□□ -2.19
LRRC39Q96DD0 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 RNU1-17P-201ENST00000363022 152 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 RNA5SP493-201ENST00000364115 91 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 SNORD116.1-201ENST00000365628 92 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 MTCO3P46-201ENST00000425787 232 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 CALM1P1-201ENST00000442082 433 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC245517.4-201ENST00000448601 281 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 RPL23AP35-201ENST00000451906 501 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC099513.1-201ENST00000490423 301 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC119751.4-201ENST00000507498 357 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 SNORA19.3-201ENST00000516165 130 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC011979.2-201ENST00000527568 352 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC023050.2-201ENST00000544968 387 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AC137800.2-201ENST00000574375 120 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AL391813.2-201ENST00000609113 322 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AL356596.1-201ENST00000624230 379 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 AL359757.2-201ENST00000624309 274 ntBASIC1.39□□□□□ -2.19
LRRC39Q96DD0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LRRC39Q96DD0 Y_RNA.597-201ENST00000410463 100 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC39Q96DD0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.38□□□□□ -2.19
LRRC39Q96DD0 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 HSPE1P24-201ENST00000450782 238 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 AC104982.1-201ENST00000478775 574 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 AC098862.1-201ENST00000504991 413 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 RNU6-201P-201ENST00000517100 61 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 AC013828.2-201ENST00000532487 235 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.38□□□□□ -2.19
LRRC39Q96DD0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC39Q96DD0 AC015720.1-201ENST00000565251 277 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 SUB1P4-201ENST00000566062 339 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 MIR3169-201ENST00000578032 83 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC39Q96DD0 AL355816.2-201ENST00000610049 647 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 U6.42-201ENST00000618440 107 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC39Q96DD0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.38□□□□□ -2.19
LRRC39Q96DD0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 ZNF72P-201ENST00000425869 1908 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 ZNF29P-201ENST00000225587 168 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 RNU6-271P-201ENST00000363858 105 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 RNU6-482P-201ENST00000391068 107 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 RNU4-22P-201ENST00000411058 166 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 PIGPP2-201ENST00000411569 458 ntBASIC1.37□□□□□ -2.19
LRRC39Q96DD0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC39Q96DD0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms