Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 Z83843.1-201ENST00000604070 3685 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRT40Q6A162 Y_RNA.80-201ENST00000362996 102 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU1-115P-201ENST00000365329 160 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU6-395P-201ENST00000365662 106 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 Y_RNA.485-201ENST00000384395 102 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 MIR301A-201ENST00000385261 86 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU6-174P-201ENST00000410406 106 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU6-1025P-201ENST00000410629 104 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU6-325P-201ENST00000411132 105 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.76□□□□□ -1.81
KRT40Q6A162 BX276092.3-201ENST00000424182 230 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RPL27AP8-201ENST00000424277 446 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 MTCYBP10-201ENST00000424905 650 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.76□□□□□ -1.81
KRT40Q6A162 AL136097.1-201ENST00000456945 913 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 HMGB3P30-201ENST00000457863 606 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 AP000873.1-201ENST00000463987 400 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 AC128713.1-201ENST00000471495 306 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU1-143P-201ENST00000516296 146 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU4-77P-201ENST00000516692 156 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 HMGB1P14-201ENST00000557424 591 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 AC113195.1-201ENST00000579952 141 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 MIR3149-201ENST00000584629 83 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 AC092447.9-201ENST00000603395 144 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 U1.23-201ENST00000610293 146 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 RNU1-68P-201ENST00000615382 146 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 U1.39-201ENST00000621562 146 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.76□□□□□ -1.81
KRT40Q6A162 AC073476.4-201ENST00000628409 72 ntBASIC3.76□□□□□ -1.81
KRT40Q6A162 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRT40Q6A162 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
KRT40Q6A162 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.76□□□□□ -1.81
KRT40Q6A162 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KRT40Q6A162 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRT40Q6A162 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRT40Q6A162 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.75□□□□□ -1.81
KRT40Q6A162 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRT40Q6A162 RNA5SP167-201ENST00000365461 116 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 Y_RNA.452-201ENST00000384202 108 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.75□□□□□ -1.81
KRT40Q6A162 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.75□□□□□ -1.81
KRT40Q6A162 AC011816.1-201ENST00000441346 546 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 PCMTD1P1-201ENST00000455560 355 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 AC116655.1-201ENST00000508324 901 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.75□□□□□ -1.81
KRT40Q6A162 SNORA70.16-201ENST00000516390 95 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 SNORA64.4-201ENST00000516632 81 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 SNORD116.3-201ENST00000517176 78 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.75□□□□□ -1.81
KRT40Q6A162 MIR3921-201ENST00000577308 85 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.75□□□□□ -1.81
KRT40Q6A162 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.75□□□□□ -1.81
KRT40Q6A162 VN1R107P-201ENST00000601784 209 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 AC006023.1-201ENST00000603944 259 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 AL121917.1-203ENST00000605534 577 ntBASIC3.75□□□□□ -1.81
KRT40Q6A162 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.75□□□□□ -1.81
KRT40Q6A162 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRT40Q6A162 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRT40Q6A162 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRT40Q6A162 AL021368.2-201ENST00000606125 5352 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
KRT40Q6A162 AC091812.1-201ENST00000432235 1948 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 Y_RNA.47-201ENST00000362697 108 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 SNORA5B-201ENST00000363786 132 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 SNORD14B-201ENST00000364533 90 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 Y_RNA.428-201ENST00000384078 102 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 Y_RNA.455-201ENST00000384230 98 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.74□□□□□ -1.81
KRT40Q6A162 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.74□□□□□ -1.81
KRT40Q6A162 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.74□□□□□ -1.81
KRT40Q6A162 CHEK2P4-201ENST00000450340 246 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 RNU7-170P-201ENST00000459303 61 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 U8.20-201ENST00000459445 131 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.74□□□□□ -1.81
KRT40Q6A162 AC022447.4-201ENST00000504053 364 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.74□□□□□ -1.81
KRT40Q6A162 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.74□□□□□ -1.81
KRT40Q6A162 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.74□□□□□ -1.81
KRT40Q6A162 SUB1P3-201ENST00000564581 315 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.74□□□□□ -1.81
KRT40Q6A162 MIR5004-201ENST00000579078 107 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 CPDP1-201ENST00000579660 283 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AC006006.1-201ENST00000603082 144 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AC018889.1-201ENST00000605372 397 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AF117829.1-206ENST00000621883 3802 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 AC138305.3-201ENST00000624988 240 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 U6.98-201ENST00000637157 84 ntBASIC3.74□□□□□ -1.81
KRT40Q6A162 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
KRT40Q6A162 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRT40Q6A162 AC005592.1-201ENST00000566527 1640 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AL353746.1-201ENST00000566293 6881 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 MIR449A-201ENST00000362113 91 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 Y_RNA.48-201ENST00000362710 103 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 SNORD56.3-201ENST00000363507 71 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms