Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MTCO3P13-201ENST00000577757 781 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 MIR5047-201ENST00000579212 100 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 MIR3922-201ENST00000585192 84 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AC078795.3-201ENST00000602913 472 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 RNVU1-4-201ENST00000612985 164 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AC092608.2-201ENST00000624427 218 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 AC241585.2-209ENST00000638217 143 ntBASIC3.29□□□□□ -1.88
NKX6-1P78426 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX6-1P78426 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NKX6-1P78426 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX6-1P78426 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
NKX6-1P78426 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX6-1P78426 Y_RNA.128-201ENST00000363391 112 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 SNORA63-201ENST00000363450 132 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 RNU6-487P-201ENST00000365430 104 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 AL354751.2-201ENST00000415471 210 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 EIF4EP2-201ENST00000422816 654 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX6-1P78426 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX6-1P78426 AC097462.2-201ENST00000504623 481 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 AC090877.1-201ENST00000561418 344 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX6-1P78426 AP001836.1-201ENST00000604675 523 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 AL356157.2-201ENST00000605122 111 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 AC005000.2-201ENST00000605468 310 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX6-1P78426 AC134503.1-201ENST00000633048 54 ntBASIC3.28□□□□□ -1.88
NKX6-1P78426 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX6-1P78426 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
NKX6-1P78426 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
NKX6-1P78426 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX6-1P78426 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX6-1P78426 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX6-1P78426 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX6-1P78426 MIR369-201ENST00000362155 70 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 Y_RNA.197-201ENST00000364004 102 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 RNU6-890P-201ENST00000384121 107 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 SNORA41-201ENST00000384675 132 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 RNU6-331P-201ENST00000384724 107 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 RNA5SP390-201ENST00000410191 113 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 AC243964.1-201ENST00000441814 261 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 RPS3AP46-201ENST00000448352 682 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX6-1P78426 RPS27P26-201ENST00000494583 239 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 GZMAP1-201ENST00000503054 631 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX6-1P78426 SCARNA16.2-201ENST00000516520 172 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 RNU5B-3P-201ENST00000516601 115 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 SNORA31.23-201ENST00000517219 133 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 AC022695.1-201ENST00000522089 237 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX6-1P78426 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX6-1P78426 MIR5187-201ENST00000583479 76 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 MIR4298-201ENST00000584380 73 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX6-1P78426 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX6-1P78426 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX6-1P78426 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
NKX6-1P78426 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NKX6-1P78426 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NKX6-1P78426 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
NKX6-1P78426 AC009541.1-201ENST00000438279 2662 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 SNORD42.2-201ENST00000365570 69 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 Y_RNA.394-201ENST00000383942 103 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 RNU6-1040P-201ENST00000383974 107 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NKX6-1P78426 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX6-1P78426 Y_RNA.639-201ENST00000458981 102 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX6-1P78426 RAC1P2-201ENST00000511164 579 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 RNA5SP384-201ENST00000516615 116 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.26□□□□□ -1.89
NKX6-1P78426 AC007991.1-201ENST00000522680 631 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX6-1P78426 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NKX6-1P78426 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX6-1P78426 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.26□□□□□ -1.89
NKX6-1P78426 AL391813.1-201ENST00000603098 260 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 AL137849.1-201ENST00000604767 169 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 SNORA62.6-201ENST00000606322 83 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 RNU1-30P-201ENST00000606575 163 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 RNU6-91P-201ENST00000607774 107 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 AC096772.1-201ENST00000609146 564 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.26□□□□□ -1.89
NKX6-1P78426 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.26□□□□□ -1.89
NKX6-1P78426 RBBP8P1-201ENST00000449447 1844 ntBASIC3.26□□□□□ -1.89
NKX6-1P78426 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.25□□□□□ -1.89
NKX6-1P78426 MTND4P27-201ENST00000450813 1354 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NKX6-1P78426 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NKX6-1P78426 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX6-1P78426 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NKX6-1P78426 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX6-1P78426 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX6-1P78426 PWAR6-201ENST00000552334 4618 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
NKX6-1P78426 RNA5SP50-201ENST00000363731 107 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms