Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL139413.1-201ENST00000421309 217 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 Z82209.1-201ENST00000422141 2135 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 USP9YP14-201ENST00000430663 563 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AL596276.1-201ENST00000434465 418 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 RPL7P43-201ENST00000478876 753 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AC090096.1-201ENST00000489168 390 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AC105313.1-201ENST00000509121 353 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AC008526.1-201ENST00000509149 338 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 MTND3P25-201ENST00000509243 135 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-405P-201ENST00000516637 110 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AC135279.1-201ENST00000543493 504 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AC009063.1-201ENST00000563342 702 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 AC008945.2-201ENST00000606056 604 ntBASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATG4BQ9Y4P1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-1120P-201ENST00000362988 108 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 SNORA38-201ENST00000363946 132 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-487P-201ENST00000365430 104 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 Y_RNA.381-201ENST00000365666 102 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 XGY1-201ENST00000381172 446 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 OR5H15-201ENST00000383696 930 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AL445529.1-201ENST00000398713 389 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 FTH1P15-201ENST00000406984 280 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 RNA5SP181-201ENST00000410246 98 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC007064.1-201ENST00000412238 351 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 MTCO2P18-201ENST00000457151 658 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 RPL36AP48-201ENST00000485521 314 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC011005.2-201ENST00000487324 359 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC010486.1-201ENST00000511793 424 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 MIR892C-201ENST00000516410 77 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 RNA5SP402-201ENST00000517148 110 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 MIR4703-201ENST00000577728 79 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 MIR4435-1-201ENST00000582552 80 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC073539.2-201ENST00000597113 165 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AL391646.1-201ENST00000603860 190 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC245008.1-201ENST00000608123 476 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 AC096772.1-201ENST00000609146 564 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 U4atac.1-201ENST00000618345 95 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 SCARNA4-202ENST00000625402 129 ntBASIC2.27□□□□□ -2.05
ATG4BQ9Y4P1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 Z75746.1-201ENST00000440243 2080 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-715P-201ENST00000365204 103 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RNU6-606P-201ENST00000384721 111 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RNU4-55P-201ENST00000410731 137 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 TOMM20P4-201ENST00000427861 435 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AL118520.1-201ENST00000450770 291 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC006026.2-201ENST00000457376 180 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RNU7-63P-201ENST00000459054 62 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 MRPL42P6-201ENST00000486397 371 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 HMGB1P30-201ENST00000492455 606 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC092436.1-201ENST00000506450 503 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC108078.1-201ENST00000508073 725 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RNU1-86P-201ENST00000516108 154 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RNU1-107P-201ENST00000516617 154 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RNU1-104P-201ENST00000517280 175 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AP004607.1-201ENST00000524456 203 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AL512310.1-201ENST00000548639 172 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 CR383656.8-201ENST00000549046 145 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC024909.2-201ENST00000553035 286 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC009163.5-201ENST00000575421 637 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC008752.3-201ENST00000588113 712 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 Z99129.1-201ENST00000612510 255 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC093783.1-201ENST00000612976 329 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 uc_338.11-201ENST00000619132 160 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 AC010378.1-201ENST00000619270 362 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 MIR1291-201ENST00000627649 87 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 MIR3529-201ENST00000637713 78 ntBASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ATG4BQ9Y4P1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms