Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 BRK1P2-201ENST00000442875 223 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 MTATP6P14-201ENST00000455189 673 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 RNU5B-3P-201ENST00000516601 115 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 MIR4765-201ENST00000585007 77 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 VN1R82P-201ENST00000601481 356 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 AC008121.1-201ENST00000603244 268 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 HMGB1P24-202ENST00000615653 685 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 AC091925.1-201ENST00000623204 462 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 RNU6-777P-201ENST00000364265 104 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 RNU4-38P-201ENST00000364472 129 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 RNU6-748P-201ENST00000384648 107 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 SNRPEP10-201ENST00000420249 274 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 FABP5P14-201ENST00000437273 393 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC117503.1-201ENST00000472241 394 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 RPS27AP10-201ENST00000496103 208 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC023141.11-201ENST00000508864 202 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC010587.2-201ENST00000511727 448 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC024619.4-201ENST00000580924 316 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC069294.1-201ENST00000608397 350 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC006386.1-201ENST00000619436 415 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 FRG1KP-201ENST00000623592 341 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC091932.3-201ENST00000624223 323 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 AC010608.3-201ENST00000625048 527 ntBASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.44□□□□□ -2.18
SHANK3Q9BYB0 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RN7SKP158-201ENST00000410453 326 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC006366.1-201ENST00000422002 759 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RAC1P6-201ENST00000423911 575 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 HMGN2P10-201ENST00000448085 265 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 ANKRD26P4-201ENST00000455755 950 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC005410.1-202ENST00000460347 485 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RPS23P4-201ENST00000487908 423 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 SNORA31.16-201ENST00000516773 139 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AP004247.1-201ENST00000531556 1289 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC136618.2-201ENST00000575091 400 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC005261.5-201ENST00000596280 355 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AL589743.7-201ENST00000612637 233 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 SDR42E1P4-201ENST00000620894 481 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC080100.1-201ENST00000624239 5356 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RNU6-1280P-201ENST00000365211 107 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC106883.1-201ENST00000418805 562 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 PTGES3P4-201ENST00000426243 356 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RPL31P35-201ENST00000431058 377 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 USP9YP24-201ENST00000434374 697 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 MTND3P1-201ENST00000441336 220 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 USP9YP17-201ENST00000444617 696 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AF213884.2-201ENST00000510417 903 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RNA5SP165-201ENST00000517142 115 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC006199.1-201ENST00000548728 219 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 MIR4293-201ENST00000584305 78 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AL096840.1-201ENST00000603287 93 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC112187.2-201ENST00000604345 283 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 RNU4-5P-201ENST00000607255 135 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 AC099654.8-201ENST00000637757 681 ntBASIC1.43□□□□□ -2.18
SHANK3Q9BYB0 SNORA62.1-201ENST00000364287 154 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 RNU4-68P-201ENST00000364314 141 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 RNU6-701P-201ENST00000384059 107 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 Y_RNA.471-201ENST00000384312 102 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 RNU6-906P-201ENST00000384700 70 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 MIR1302-8-201ENST00000408342 128 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 SKA2P1-201ENST00000425592 390 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 TXNL1P1-201ENST00000429528 554 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 AP000542.1-201ENST00000448473 371 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 AC098591.2-201ENST00000510152 315 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 AC109329.1-201ENST00000518744 317 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 AC118273.2-201ENST00000532092 465 ntBASIC1.42□□□□□ -2.18
SHANK3Q9BYB0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms