Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC000111.3-201ENST00000433478 193 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC43Q96MW1 SNRPFP4-201ENST00000456366 242 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 RNU1-86P-201ENST00000516108 154 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 RNU1-107P-201ENST00000516617 154 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 SNORA31.23-201ENST00000517219 133 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC109329.1-201ENST00000518744 317 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC107953.1-201ENST00000522216 297 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 RANP3-201ENST00000530970 276 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 BNIP3P6-201ENST00000549284 499 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC087883.1-201ENST00000551882 391 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC093249.1-201ENST00000567049 203 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC090578.1-201ENST00000604955 591 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC098614.4-201ENST00000607601 462 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC009090.3-201ENST00000616553 565 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 AC093648.1-201ENST00000623546 606 ntBASIC2.35□□□□□ -2.03
CCDC43Q96MW1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC43Q96MW1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC43Q96MW1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 RNU6-487P-201ENST00000365430 104 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 RNU6-622P-201ENST00000384272 103 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 RNU5A-2P-201ENST00000384337 116 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 Y_RNA.576-201ENST00000384781 102 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 HMGB3P2-201ENST00000411913 584 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 C1DP2-201ENST00000418167 426 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AL136380.1-201ENST00000447970 162 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AL513124.1-201ENST00000450410 614 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 ART2BP-201ENST00000453501 499 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AC107032.1-201ENST00000485945 480 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 SNORA43.2-201ENST00000516652 128 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 RNU6-685P-201ENST00000517088 95 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 RNU6-586P-201ENST00000517265 104 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 IGLV3-17-201ENST00000519099 244 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AC090572.1-201ENST00000519251 160 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 MIR5692A1-201ENST00000580523 69 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 MIR3682-201ENST00000581338 84 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AC087241.4-201ENST00000612441 480 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 AC091304.6-201ENST00000619761 202 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 SCARNA4-202ENST00000625402 129 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 MIR203B-201ENST00000636080 86 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 MIR219B-201ENST00000637023 88 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.34□□□□□ -2.03
CCDC43Q96MW1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC43Q96MW1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
CCDC43Q96MW1 OR4G2P-201ENST00000328113 903 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 SNORA40.3-201ENST00000390964 122 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 AC074117.2-201ENST00000417130 397 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC43Q96MW1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC43Q96MW1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC43Q96MW1 RNU6-717P-201ENST00000459076 104 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 AC092436.1-201ENST00000506450 503 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 RNU2-19P-201ENST00000517288 84 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 AL031274.2-201ENST00000599419 203 ntBASIC2.33□□□□□ -2.04
CCDC43Q96MW1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC43Q96MW1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 SNORD115-7-201ENST00000365306 82 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 RNU6-116P-201ENST00000384042 109 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 RNA5SP338-201ENST00000410495 85 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 HMGN1P14-201ENST00000412459 517 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AL365400.1-201ENST00000431854 640 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 MTCO3P5-201ENST00000433620 714 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC104058.1-201ENST00000448028 297 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AL033528.1-201ENST00000453780 140 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 MTCYBP1-201ENST00000454315 1119 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC104806.1-201ENST00000508720 308 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 MTND3P25-201ENST00000509243 135 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC034114.1-201ENST00000520293 285 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC027807.1-201ENST00000559921 996 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 MIR3945-201ENST00000581853 98 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC098848.2-201ENST00000588023 330 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC007229.1-201ENST00000590455 412 ntBASIC2.32□□□□□ -2.04
CCDC43Q96MW1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms