Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.92□□□□□ -2.1
ITCHQ96J02 ISCA1P6-201ENST00000427740 390 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AC027124.2-201ENST00000428249 105 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 MTATP6P16-201ENST00000434543 526 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AC016691.1-201ENST00000441321 413 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 RPL7P12-201ENST00000446719 750 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 GAPDHP17-201ENST00000449858 1001 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.92□□□□□ -2.1
ITCHQ96J02 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.92□□□□□ -2.1
ITCHQ96J02 AC116562.3-201ENST00000506136 177 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AC090572.1-201ENST00000519251 160 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.92□□□□□ -2.1
ITCHQ96J02 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.92□□□□□ -2.1
ITCHQ96J02 AC068587.5-201ENST00000528506 175 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.92□□□□□ -2.1
ITCHQ96J02 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ITCHQ96J02 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.92□□□□□ -2.1
ITCHQ96J02 AL138889.2-201ENST00000603883 242 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AC009233.1-201ENST00000616477 371 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 AL031601.2-202ENST00000622650 282 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
ITCHQ96J02 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
ITCHQ96J02 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ITCHQ96J02 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ITCHQ96J02 AP000568.1-201ENST00000282964 442 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 RNU6-858P-201ENST00000362436 107 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 SNORD14B-201ENST00000364533 90 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 RNU6-1179P-201ENST00000384667 107 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 MIR578-201ENST00000384828 96 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 MIR10A-201ENST00000385043 110 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 U3.40-201ENST00000408706 208 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 EEF1A1P40-201ENST00000412883 573 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AL353706.1-201ENST00000436728 494 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.91□□□□□ -2.1
ITCHQ96J02 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.91□□□□□ -2.1
ITCHQ96J02 RNA5SP269-201ENST00000459032 137 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 snoU109.2-201ENST00000459316 135 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 SNORD42A-201ENST00000459584 64 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 RPL7P43-201ENST00000478876 753 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.91□□□□□ -2.1
ITCHQ96J02 AF213884.2-201ENST00000510417 903 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 RNU6-410P-201ENST00000517006 107 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.91□□□□□ -2.1
ITCHQ96J02 FAM92A1P1-201ENST00000528023 890 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 RANP3-201ENST00000530970 276 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AP000873.5-201ENST00000533906 236 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AC135279.1-201ENST00000543493 504 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.91□□□□□ -2.1
ITCHQ96J02 AC009063.1-201ENST00000563342 702 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.91□□□□□ -2.1
ITCHQ96J02 AC012414.6-201ENST00000568241 401 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AC137800.2-201ENST00000574375 120 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.91□□□□□ -2.1
ITCHQ96J02 AL670379.4-201ENST00000605279 254 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 AC093648.1-201ENST00000623546 606 ntBASIC1.91□□□□□ -2.1
ITCHQ96J02 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ITCHQ96J02 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.91□□□□□ -2.1
ITCHQ96J02 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
ITCHQ96J02 RNU6-72P-201ENST00000384285 79 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 RNU6-297P-201ENST00000384636 107 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 RNA5SP270-201ENST00000411361 118 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.9□□□□□ -2.11
ITCHQ96J02 AL360271.2-201ENST00000447710 161 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.9□□□□□ -2.11
ITCHQ96J02 snoU13.15-201ENST00000459407 104 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 MED28P2-201ENST00000475771 317 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 MTAPP1-201ENST00000489154 819 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 RNU6-685P-201ENST00000517088 95 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 AP004607.1-201ENST00000524456 203 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.9□□□□□ -2.11
ITCHQ96J02 OR11H5P-201ENST00000554039 926 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
ITCHQ96J02 Z94722.1-201ENST00000604328 474 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 AL138963.2-201ENST00000605137 226 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
ITCHQ96J02 AL359740.1-201ENST00000624340 592 ntBASIC1.9□□□□□ -2.11
ITCHQ96J02 MTND5P17-201ENST00000418405 1603 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
ITCHQ96J02 AC009487.4-201ENST00000624969 3585 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 RNU6-942P-201ENST00000363002 107 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 U3.4-201ENST00000363352 213 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 Y_RNA.576-201ENST00000384781 102 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 RN7SKP158-201ENST00000410453 326 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 MTND3P17-201ENST00000416968 344 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.89□□□□□ -2.11
ITCHQ96J02 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.89□□□□□ -2.11
ITCHQ96J02 MTCYBP5-201ENST00000423752 1135 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 TOMM20P4-201ENST00000427861 435 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 RPL31P35-201ENST00000431058 377 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 GPR143P-201ENST00000434155 205 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 AC079781.2-201ENST00000446424 169 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 MTCYBP1-201ENST00000454315 1119 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 AC090515.1-201ENST00000465295 476 ntBASIC1.89□□□□□ -2.11
ITCHQ96J02 HMGB1P30-201ENST00000492455 606 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms