Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-723P-201ENST00000383973 107 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 MIR19A-201ENST00000384878 82 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 RPL26P27-201ENST00000414397 437 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 RPS24P7-201ENST00000416921 246 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 MTCO2P21-201ENST00000419780 677 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 SNORD97-201ENST00000459187 142 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AL049829.1-201ENST00000465411 156 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 RPL30P12-201ENST00000474666 353 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 MRPS17P9-201ENST00000511924 393 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AC112206.4-201ENST00000515142 405 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 RNU6-390P-201ENST00000516259 103 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 RNU6-143P-201ENST00000516942 93 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AL359212.1-201ENST00000556608 614 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AC021739.1-201ENST00000559631 174 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AL355472.4-201ENST00000610233 626 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AL359854.1-201ENST00000614203 1594 ntBASIC1.48□□□□□ -2.17
SHANK3Q9BYB0 AP000776.1-201ENST00000530032 1663 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 NACAP2-201ENST00000318548 624 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 RNU6-1167P-201ENST00000363227 94 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 RNU1-39P-201ENST00000383897 165 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 MIR1285-1-201ENST00000408593 84 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AL356379.1-201ENST00000414105 126 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 GPM6BP2-201ENST00000432046 144 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 GPM6BP1-201ENST00000446387 144 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AC093012.1-202ENST00000549403 582 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AL596327.1-201ENST00000603629 213 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AC107214.2-201ENST00000608204 634 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AC072039.2-201ENST00000608883 439 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 AC010487.4-201ENST00000637027 61 ntBASIC1.47□□□□□ -2.17
SHANK3Q9BYB0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RNU6-35P-201ENST00000384530 107 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RNU6-220P-201ENST00000390919 107 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RNU2-62P-201ENST00000410868 191 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RNU4-22P-201ENST00000411058 166 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RPS20P15-201ENST00000412792 311 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 MTND1P28-201ENST00000435623 950 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 MTATP6P30-201ENST00000443540 664 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 HMGB1P36-201ENST00000487709 576 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RPL22P13-201ENST00000493291 347 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC010186.2-204ENST00000537668 439 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 OR1M4P-201ENST00000589199 287 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC211469.2-201ENST00000605461 205 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC112204.3-201ENST00000623822 332 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 MTND5P9-201ENST00000503854 1755 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 SNORD114-23-201ENST00000363536 72 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RNA5SP465-201ENST00000391195 109 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 EXOSC3P1-201ENST00000448649 500 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 SNORA31.3-201ENST00000516029 96 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 UBE2L4-201ENST00000587688 464 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 BNIP3P9-201ENST00000603714 553 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC005014.3-201ENST00000605985 190 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 RNU6-91P-201ENST00000607774 107 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 MIR8087-201ENST00000612745 78 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AC097655.1-201ENST00000635075 318 ntBASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK3Q9BYB0 AL442644.1-201ENST00000454390 3105 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 RNU6-853P-201ENST00000364306 107 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 RNU6-19P-201ENST00000384718 107 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 RPL7P34-201ENST00000433316 712 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 TIMM9P1-201ENST00000436122 256 ntBASIC1.45□□□□□ -2.18
SHANK3Q9BYB0 AC016691.1-201ENST00000441321 413 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 456.5 ms