Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.47□□□□□ -1.69
NFKB1P19838 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
NFKB1P19838 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.46□□□□□ -1.69
NFKB1P19838 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NFKB1P19838 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
NFKB1P19838 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NFKB1P19838 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NFKB1P19838 SNORD115-8-201ENST00000363856 82 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 SNORD115-38-201ENST00000365037 82 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 Y_RNA.497-201ENST00000384447 98 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 RNU6-417P-201ENST00000384712 107 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 MIR3065-201ENST00000390137 79 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 RNU6-1154P-201ENST00000391001 104 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NFKB1P19838 AL357139.1-201ENST00000407792 426 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 MIR1911-201ENST00000410783 80 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 ELOCP19-201ENST00000411919 318 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.46□□□□□ -1.7
NFKB1P19838 AC009237.8-201ENST00000445492 379 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.46□□□□□ -1.7
NFKB1P19838 IGLVIV-65-201ENST00000517313 360 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.46□□□□□ -1.7
NFKB1P19838 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NFKB1P19838 AC024581.2-201ENST00000619986 252 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 AL133243.3-201ENST00000617415 3004 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
NFKB1P19838 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.46□□□□□ -1.7
NFKB1P19838 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NFKB1P19838 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NFKB1P19838 AC006971.1-201ENST00000407916 4486 ntBASIC4.46□□□□□ -1.7
NFKB1P19838 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NFKB1P19838 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.45□□□□□ -1.7
NFKB1P19838 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NFKB1P19838 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.45□□□□□ -1.7
NFKB1P19838 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NFKB1P19838 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NFKB1P19838 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NFKB1P19838 RNU6-653P-201ENST00000363074 106 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 MIR487A-201ENST00000385009 80 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AC024067.1-201ENST00000426199 223 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AC005042.3-201ENST00000453230 174 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.45□□□□□ -1.7
NFKB1P19838 RPL35AP15-201ENST00000468042 339 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.45□□□□□ -1.7
NFKB1P19838 AC140059.1-201ENST00000489238 361 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 RNU6-1198P-201ENST00000516904 67 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.45□□□□□ -1.7
NFKB1P19838 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.45□□□□□ -1.7
NFKB1P19838 LINC00933-203ENST00000559812 219 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.45□□□□□ -1.7
NFKB1P19838 MIR5571-201ENST00000577998 113 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AC079587.1-201ENST00000603846 277 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AL138963.2-201ENST00000605137 226 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AC022441.3-201ENST00000605737 136 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AL023881.1-201ENST00000621088 301 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 MFSD8-242ENST00000641690 4199 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 AL109809.4-201ENST00000603520 2185 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NFKB1P19838 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.45□□□□□ -1.7
NFKB1P19838 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
NFKB1P19838 AC008568.2-201ENST00000623862 2313 ntBASIC4.45□□□□□ -1.7
NFKB1P19838 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NFKB1P19838 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.44□□□□□ -1.7
NFKB1P19838 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.44□□□□□ -1.7
NFKB1P19838 RNU4-56P-201ENST00000364700 142 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 Y_RNA.568-201ENST00000384742 113 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 RNU6-131P-201ENST00000391144 107 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 RPL37P18-201ENST00000411602 243 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.44□□□□□ -1.7
NFKB1P19838 AL162725.1-201ENST00000435405 301 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.44□□□□□ -1.7
NFKB1P19838 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.44□□□□□ -1.7
NFKB1P19838 snoU13.4-201ENST00000458916 104 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.44□□□□□ -1.7
NFKB1P19838 SNORA31.8-201ENST00000516327 108 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.44□□□□□ -1.7
NFKB1P19838 AC084757.4-201ENST00000616350 526 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NFKB1P19838 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NFKB1P19838 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NFKB1P19838 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NFKB1P19838 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NFKB1P19838 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NFKB1P19838 AC139713.2-214ENST00000642059 1811 ntBASIC4.44□□□□□ -1.7
NFKB1P19838 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NFKB1P19838 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NFKB1P19838 ZNF204P-201ENST00000416749 2397 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.43□□□□□ -1.7
NFKB1P19838 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NFKB1P19838 MIR331-201ENST00000362302 94 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 RNU1-108P-201ENST00000362556 161 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 RNU6-898P-201ENST00000365627 104 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 Y_RNA.400-201ENST00000383963 111 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 Y_RNA.571-201ENST00000384753 98 ntBASIC4.43□□□□□ -1.7
NFKB1P19838 MIR192-201ENST00000384915 110 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms