Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RPS12P24-201ENST00000412619 387 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 RPL21P90-201ENST00000415692 466 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 SNRPEP10-201ENST00000420249 274 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AL669831.1-202ENST00000428504 417 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 PGBD4P5-201ENST00000445958 426 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 OR2AQ1P-201ENST00000451972 200 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 SNORD116-28-201ENST00000516123 91 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-572P-201ENST00000516724 80 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 RPS3AP4-201ENST00000555161 764 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AC122134.1-202ENST00000569111 1201 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AL020996.3-201ENST00000606617 222 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AL590240.4-201ENST00000616908 390 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 AC130454.1-201ENST00000622948 401 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 DDX43P2-201ENST00000604753 1354 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-655P-201ENST00000362858 107 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-968P-201ENST00000384076 107 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 MRPL35P1-201ENST00000404272 572 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AL589872.1-201ENST00000426602 288 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AL022238.1-201ENST00000442557 355 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 RPL30P6-201ENST00000475925 342 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 RPS3AP22-201ENST00000488297 769 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC010468.3-201ENST00000508225 458 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-991P-201ENST00000516168 107 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AP006587.4-201ENST00000526053 529 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 SLC2A13P1-201ENST00000531560 322 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 SNRPGP1-201ENST00000553864 222 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC009977.1-201ENST00000586015 570 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 ZNF92P2-201ENST00000600543 1059 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AP001981.2-201ENST00000603241 418 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC112220.3-201ENST00000605502 502 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC022513.1-201ENST00000624512 117 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC099654.5-201ENST00000636479 350 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC100821.1-201ENST00000523153 2479 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 AC233981.2-201ENST00000611524 1614 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 CDR1-202ENST00000625883 1485 ntBASIC0.67□□□□□ -2.3
TRAV13-1A0A0B4J241 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU4-38P-201ENST00000364472 129 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-707P-201ENST00000364647 95 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 RPL23AP32-201ENST00000395315 459 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AL359634.1-202ENST00000404721 284 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 DEFB130D-201ENST00000426866 237 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 TRIM60P13-201ENST00000432350 1283 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC130509.1-201ENST00000464158 433 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 MED28P2-201ENST00000475771 317 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 HMGB1P28-201ENST00000507778 552 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC136932.1-201ENST00000574771 208 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC136618.2-201ENST00000575091 400 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC126365.2-201ENST00000580630 379 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 VN1R83P-201ENST00000595685 445 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC013244.2-201ENST00000603396 103 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 MIR8065-201ENST00000620577 100 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 AC027335.2-201ENST00000624030 375 ntBASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV13-1A0A0B4J241 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.65□□□□□ -2.3
TRAV13-1A0A0B4J241 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV13-1A0A0B4J241 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV13-1A0A0B4J241 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV13-1A0A0B4J241 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV13-1A0A0B4J241 MIR23A-201ENST00000385245 73 ntBASIC0.65□□□□□ -2.31
TRAV13-1A0A0B4J241 POLR2J4-204ENST00000418424 324 ntBASIC0.65□□□□□ -2.31
TRAV13-1A0A0B4J241 AC013410.2-201ENST00000422627 201 ntBASIC0.65□□□□□ -2.31
TRAV13-1A0A0B4J241 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms