Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 RNU6-1284P-201ENST00000363701 100 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 RNA5SP240-201ENST00000365355 128 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 CYCSP33-201ENST00000414485 327 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC244035.1-201ENST00000430042 390 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 GTF2IP20-201ENST00000431663 360 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC005094.1-201ENST00000440420 368 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 DUXAP8-207ENST00000456786 622 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 RPL37P6-201ENST00000460682 294 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 RNU6-927P-201ENST00000516199 100 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 MTND5P33-201ENST00000571250 1450 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC005951.2-201ENST00000576282 495 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC090616.3-201ENST00000582184 217 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 MIR4658-201ENST00000584344 65 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC069431.2-201ENST00000604149 1099 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC131235.4-201ENST00000609288 620 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 TUG1_2.1-201ENST00000614234 87 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 AC068057.2-201ENST00000624047 895 ntBASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK3Q9BYB0 Y_RNA.192-201ENST00000363977 102 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 SNORD116.1-201ENST00000365628 92 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 MIR1305-201ENST00000408300 86 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 RNU6-1328P-201ENST00000410938 106 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 GPM6BP3-201ENST00000442797 145 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 AC010631.1-201ENST00000474150 156 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 MTND5P13-201ENST00000513046 1079 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 DEFB108A-201ENST00000530110 222 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 AC068587.4-201ENST00000533893 186 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 MRPS36P5-201ENST00000551909 298 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 MTCYBP23-201ENST00000558717 1102 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 CYP3A137P-201ENST00000562436 69 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 AF038458.1-201ENST00000588406 262 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 AC091057.3-201ENST00000602684 733 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 AC123912.5-201ENST00000605470 343 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 MIR924-201ENST00000638017 53 ntBASIC1.5□□□□□ -2.17
SHANK3Q9BYB0 MIR330-201ENST00000362196 94 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 RNU4-92P-201ENST00000363783 136 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 RNU6-1083P-201ENST00000384022 107 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 RNU1-148P-201ENST00000384472 162 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL355143.1-201ENST00000407101 841 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 MIR1284-201ENST00000408337 120 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 U6atac.2-201ENST00000408644 118 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 RNU6-920P-201ENST00000410926 92 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 PGBD4P6-201ENST00000421501 610 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL441985.1-201ENST00000457727 251 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 EIF4EP3-201ENST00000498782 656 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 NDUFB4P2-201ENST00000509515 391 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC023538.1-201ENST00000534576 736 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL133153.1-201ENST00000557756 303 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 VN1R107P-201ENST00000601784 209 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL391001.1-201ENST00000602747 715 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL391813.1-201ENST00000603098 260 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL158050.2-201ENST00000605336 568 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 DUSP12P1-201ENST00000612874 516 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC009269.6-201ENST00000621778 588 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AP002791.1-201ENST00000623291 381 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL445984.1-201ENST00000637834 659 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 RNY4P24-201ENST00000362735 96 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 ISCA1P1-201ENST00000426679 387 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 RNU7-26P-201ENST00000458980 63 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 RNU6-703P-201ENST00000516946 107 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 HSPE1P4-201ENST00000550617 308 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC174048.1-201ENST00000603389 144 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC135507.1-201ENST00000607214 561 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC007038.2-201ENST00000608095 740 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC005332.10-201ENST00000612725 619 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AP002782.1-201ENST00000623107 614 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AL356596.1-201ENST00000624230 379 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC091965.5-201ENST00000624785 342 ntBASIC1.49□□□□□ -2.17
SHANK3Q9BYB0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms