Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX6-1P78426 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
NKX6-1P78426 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX6-1P78426 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX6-1P78426 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NKX6-1P78426 Y_RNA.2-201ENST00000362330 96 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 Y_RNA.146-201ENST00000363549 102 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 Y_RNA.187-201ENST00000363918 113 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 SNORA14A-201ENST00000364773 135 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 RNU6-336P-201ENST00000364891 107 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 RPS29P13-201ENST00000402041 169 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 FTH1P15-201ENST00000406984 280 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AC017083.1-201ENST00000428093 483 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX6-1P78426 USP9YP30-201ENST00000430729 455 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX6-1P78426 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.36□□□□□ -1.87
NKX6-1P78426 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.36□□□□□ -1.87
NKX6-1P78426 AL441985.1-201ENST00000457727 251 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 Y_RNA.670-201ENST00000516255 105 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 GNRHR2P1-201ENST00000555315 631 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.36□□□□□ -1.87
NKX6-1P78426 AC025281.1-201ENST00000567026 265 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AC009163.5-201ENST00000575421 637 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 CPDP1-201ENST00000579660 283 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 MIR5195-201ENST00000583555 115 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AC005899.2-201ENST00000584353 90 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AC080078.3-201ENST00000605407 463 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AL627309.6-201ENST00000606857 840 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 AC090971.5-201ENST00000621102 293 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 MIR3529-201ENST00000637713 78 ntBASIC3.36□□□□□ -1.87
NKX6-1P78426 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NKX6-1P78426 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NKX6-1P78426 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.36□□□□□ -1.87
NKX6-1P78426 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX6-1P78426 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.36□□□□□ -1.87
NKX6-1P78426 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
NKX6-1P78426 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX6-1P78426 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX6-1P78426 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NKX6-1P78426 RNU1-18P-201ENST00000363062 164 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 RNU6-105P-201ENST00000363909 104 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 U1.1-201ENST00000384101 164 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 RNU6-43P-201ENST00000384302 107 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR521-1-201ENST00000384902 87 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR183-201ENST00000384958 110 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR199A2-201ENST00000385289 110 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 Y_RNA.579-201ENST00000390939 94 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX6-1P78426 NDUFB4P4-201ENST00000404822 243 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR1302-11-201ENST00000408051 138 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR1302-9-201ENST00000408365 138 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR1302-10-201ENST00000408734 138 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 Z92545.1-201ENST00000411782 234 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 AC023141.4-201ENST00000412031 328 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 AL035423.1-201ENST00000420331 213 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX6-1P78426 MTCO2P12-201ENST00000427426 682 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX6-1P78426 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
NKX6-1P78426 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.35□□□□□ -1.87
NKX6-1P78426 RNU7-152P-201ENST00000458982 64 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 RN7SL293P-201ENST00000481765 281 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 RNU5F-8P-201ENST00000515941 111 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 ACA59.2-201ENST00000517061 156 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX6-1P78426 AP005902.1-201ENST00000521358 186 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR4273-201ENST00000582824 84 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 BNIP3P16-201ENST00000589779 534 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 MIR1302-2-201ENST00000607096 138 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 AC005046.1-201ENST00000608515 625 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX6-1P78426 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
NKX6-1P78426 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX6-1P78426 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX6-1P78426 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX6-1P78426 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NKX6-1P78426 MTND5P10-201ENST00000603719 1809 ntBASIC3.35□□□□□ -1.87
NKX6-1P78426 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NKX6-1P78426 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
NKX6-1P78426 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX6-1P78426 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.34□□□□□ -1.87
NKX6-1P78426 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NKX6-1P78426 Y_RNA.111-201ENST00000363248 100 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX6-1P78426 RNU6-19P-201ENST00000384718 107 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 MIR767-201ENST00000390228 109 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 RNU1-101P-201ENST00000391171 127 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 RNA5SP354-201ENST00000391247 136 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX6-1P78426 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 AF228730.4-201ENST00000421457 183 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 USMG5P1-201ENST00000425964 177 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 Z82205.1-201ENST00000428456 297 ntBASIC3.34□□□□□ -1.87
NKX6-1P78426 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.34□□□□□ -1.87
NKX6-1P78426 AL133396.1-201ENST00000432048 687 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms