Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC104685.1-201ENST00000502445 371 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC098862.1-201ENST00000504991 413 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC010486.2-201ENST00000505572 483 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RNU5F-8P-201ENST00000515941 111 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MIR514B-201ENST00000516774 80 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RNU6-840P-201ENST00000517275 65 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RNU1-104P-201ENST00000517280 175 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AP005660.1-201ENST00000522972 293 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MTND1P24-201ENST00000552175 861 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 HMGB1P14-201ENST00000557424 591 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.75□□□□□ -2.13
SCN4AP35499 AGGF1P5-201ENST00000567900 919 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 MIR3915-201ENST00000578518 97 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 RPS15AP11-201ENST00000594193 385 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AL031281.1-201ENST00000604049 488 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AL136363.1-201ENST00000605349 337 ntBASIC1.75□□□□□ -2.13
SCN4AP35499 AC092125.1-201ENST00000562568 1995 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.74□□□□□ -2.13
SCN4AP35499 Y_RNA.234-201ENST00000364409 97 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AL139397.2-201ENST00000404529 772 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 TPMTP3-201ENST00000411928 735 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN4AP35499 MTND1P30-201ENST00000441241 901 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN4AP35499 AP000542.1-201ENST00000448473 371 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AL033528.1-201ENST00000453780 140 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AL139109.1-201ENST00000455491 297 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AC108059.3-201ENST00000456388 214 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 RPS27P21-201ENST00000486977 252 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 RPS27P26-201ENST00000494583 239 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.74□□□□□ -2.13
SCN4AP35499 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN4AP35499 RNA5SP471-201ENST00000516971 106 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN4AP35499 AC123904.2-201ENST00000548059 300 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 MIR3660-201ENST00000584845 100 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.74□□□□□ -2.13
SCN4AP35499 AC239868.4-201ENST00000608318 671 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 TUSC7.1-201ENST00000610969 165 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AC009878.1-201ENST00000621819 340 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AC131159.1-201ENST00000621854 213 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 AL133216.2-202ENST00000634512 349 ntBASIC1.74□□□□□ -2.13
SCN4AP35499 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
SCN4AP35499 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCN4AP35499 AC073343.1-201ENST00000328239 651 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RNU6-433P-201ENST00000363216 104 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RNU6-931P-201ENST00000363850 107 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 MIR598-201ENST00000384868 97 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN4AP35499 GAPDHP17-201ENST00000449858 1001 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 HMGN2P18-201ENST00000450680 270 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN4AP35499 MTND4LP3-201ENST00000468320 276 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RPS15AP34-201ENST00000487776 387 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 MRPS36P2-201ENST00000512569 299 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN4AP35499 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN4AP35499 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.73□□□□□ -2.13
SCN4AP35499 AC013828.2-201ENST00000532487 235 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC009127.3-201ENST00000570531 403 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC090616.2-202ENST00000584248 222 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.73□□□□□ -2.13
SCN4AP35499 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN4AP35499 AC007494.3-201ENST00000624660 743 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN4AP35499 AC099654.7-201ENST00000635788 2127 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC007785.2-201ENST00000598627 1916 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 Y_RNA.36-201ENST00000362602 112 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RNU1-39P-201ENST00000383897 165 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 MIR1-2-201ENST00000384961 85 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 ELOCP17-201ENST00000414751 326 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 ISCA1P1-201ENST00000426679 387 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RPL7L1P10-201ENST00000427790 463 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 MTND5P25-201ENST00000430499 799 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AL365184.2-201ENST00000431139 435 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 IPO7P1-201ENST00000442031 636 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN4AP35499 AL139824.2-201ENST00000458731 1095 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN4AP35499 RNU6-1129P-201ENST00000515964 104 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RNU6-390P-201ENST00000516259 103 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 RNU6-143P-201ENST00000516942 93 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCN4AP35499 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCN4AP35499 AC012435.1-202ENST00000568772 240 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SCN4AP35499 AC005498.1-201ENST00000592125 465 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC002545.1-201ENST00000592511 181 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC025594.3-201ENST00000613068 790 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 MIR6788-201ENST00000618842 66 ntBASIC1.73□□□□□ -2.13
SCN4AP35499 AC010889.1-201ENST00000566193 2666 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 AP000568.1-201ENST00000282964 442 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 RNU4-1-201ENST00000363925 141 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN4AP35499 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN4AP35499 RPS15AP27-201ENST00000449183 343 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 419.3 ms