Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
HDAC3O15379 AC105137.2-201ENST00000569073 466 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 AP000907.4-201ENST00000604143 237 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 AP001330.5-201ENST00000607176 411 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HDAC3O15379 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
HDAC3O15379 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.05
HDAC3O15379 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HDAC3O15379 ZNF680P1-201ENST00000436625 1469 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 MTND4P35-201ENST00000604257 1375 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 Y_RNA.9-201ENST00000362354 101 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 Y_RNA.38-201ENST00000362617 102 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 RNU6-1097P-201ENST00000363586 107 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 RNY4P14-201ENST00000363656 96 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 RNU6-960P-201ENST00000364056 120 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AL591416.1-201ENST00000404015 867 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 RNU2-39P-201ENST00000410604 198 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 USP9YP6-201ENST00000413550 854 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 HMGN2P38-201ENST00000423806 265 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 MTCO1P20-201ENST00000425366 358 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AL606489.2-201ENST00000433886 234 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.27□□□□□ -2.05
HDAC3O15379 TAAR7P-201ENST00000436141 242 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 RPL7P54-201ENST00000438336 674 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.27□□□□□ -2.05
HDAC3O15379 NEFMP1-201ENST00000443423 1006 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC079781.2-201ENST00000446424 169 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 NFU1P2-201ENST00000448700 469 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AL162395.1-201ENST00000457882 422 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.27□□□□□ -2.05
HDAC3O15379 RPS29P15-201ENST00000458329 171 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.27□□□□□ -2.05
HDAC3O15379 AC079382.1-201ENST00000493346 557 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HDAC3O15379 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.27□□□□□ -2.05
HDAC3O15379 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HDAC3O15379 AL359273.1-201ENST00000510918 627 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC104383.1-201ENST00000530297 370 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.27□□□□□ -2.05
HDAC3O15379 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.27□□□□□ -2.05
HDAC3O15379 RPS3AP4-201ENST00000555161 764 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.27□□□□□ -2.05
HDAC3O15379 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.27□□□□□ -2.05
HDAC3O15379 AC025678.1-201ENST00000567861 338 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC008752.3-201ENST00000588113 712 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC012507.3-201ENST00000603556 477 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC093788.1-201ENST00000609356 927 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.27□□□□□ -2.05
HDAC3O15379 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.27□□□□□ -2.05
HDAC3O15379 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.27□□□□□ -2.05
HDAC3O15379 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HDAC3O15379 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC3O15379 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC3O15379 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC3O15379 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC3O15379 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
HDAC3O15379 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HDAC3O15379 RNU6-1085P-201ENST00000363576 107 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 SNORA62.1-201ENST00000364287 154 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 RNU6-61P-201ENST00000365528 109 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 SNORA51.11-201ENST00000384442 131 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 MIR634-201ENST00000385208 97 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 MIR325-201ENST00000385260 98 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 MIR1277-201ENST00000408536 78 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.26□□□□□ -2.05
HDAC3O15379 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC3O15379 AC000111.3-201ENST00000433478 193 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 BNIP3P2-201ENST00000441221 577 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.26□□□□□ -2.05
HDAC3O15379 CBWD4P-201ENST00000445695 655 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL031659.1-201ENST00000447075 539 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.26□□□□□ -2.05
HDAC3O15379 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HDAC3O15379 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.26□□□□□ -2.05
HDAC3O15379 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 MTAPP1-201ENST00000489154 819 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC116562.3-201ENST00000506136 177 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.26□□□□□ -2.05
HDAC3O15379 AC108078.2-201ENST00000510750 236 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.26□□□□□ -2.05
HDAC3O15379 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.26□□□□□ -2.05
HDAC3O15379 RNA5SP356-201ENST00000515972 94 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.26□□□□□ -2.05
HDAC3O15379 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.26□□□□□ -2.05
HDAC3O15379 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.26□□□□□ -2.05
HDAC3O15379 AC068587.5-201ENST00000528506 175 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.26□□□□□ -2.05
HDAC3O15379 AL359212.1-201ENST00000556608 614 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.26□□□□□ -2.05
HDAC3O15379 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.26□□□□□ -2.05
HDAC3O15379 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.26□□□□□ -2.05
HDAC3O15379 SNORA59B-202ENST00000578183 701 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL670379.6-201ENST00000603753 252 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL670379.11-201ENST00000604059 253 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC007621.1-201ENST00000604544 437 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AC008162.1-201ENST00000604718 254 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL670379.1-201ENST00000604752 252 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL670379.5-201ENST00000605253 252 ntBASIC2.26□□□□□ -2.05
HDAC3O15379 AL670379.12-201ENST00000605291 253 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms